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SCNpilot_expt_1000_bf_scaffold_263_curated_28

Organism: scnpilot_dereplicated_Kapabacteria_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(39799..40881)

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter MFP subunit id=7718799 bin=BACIGN_2 species=Joostella marina genus=Joostella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 361.0
  • Bit_score: 683
  • Evalue 9.00e-194
Toluene efflux pump periplasmic linker protein TtgA {ECO:0000313|EMBL:KHJ37586.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.0
  • Coverage: 365.0
  • Bit_score: 287
  • Evalue 2.60e-74
RND family efflux transporter, MFP subunit similarity KEGG
DB: KEGG
  • Identity: 39.3
  • Coverage: 361.0
  • Bit_score: 260
  • Evalue 5.90e-67

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Taxonomy

Pedobacter glucosidilyticus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1083
ATGAACAAAAAAGTACTGATCTGGACGATTGTGGTGGCCGTGGCCATCGGTGCATTCTTCCTCATCCGCTCCCTTACAGGTACGTCGGCGGCCAGGGGACCCGGTGCGGGAACACCACCGGGTGGACCGGGTGGCGTCAAGGCGGGTCCGGTTTCCGTTCGTGGAATCGTCGTCCAGCCGTCGTCGTTCGACGAATCGATCACGCTGACGGGCAGCATCATGGCCAACGAATCGGTCGAGATCCGCAGCGAAGTCAGCGGTCGTATCATCAAGCTCGGTTTCCAGGAGGGGGGGCTCGTGCGCAAGGGGCAGCTTCTGGTGAAGCTGTTCGATGCCGACCTGCGTGCCCAGCTCGCCAAGGCCCGCCAGCAACTGAAGATCGATGAGGACAAGATGCGTCGCTATGCCGAGCTGAAGCGCGTCGACGGCGTGAGCACGGAAGAGTACGAAGTGGCGGCTGCCCAGGTCGAGATGCGCAAGGCCGAGATCGACGTCCTGCTCGCCCAGATCTCCCGCACGGAAATCCTCGCTCCGTTCTCCGGACGCATAGGATTGAGGCAAGTCAGCGACGGCGCCGTCATCACGACGAATACCCTGATCGCCGTCCTGGCCGATGAACAGCAACTCAAACTCGAATGCTCGATTCCCGAACGCTATGCGTCAACCGTGGCTCTGGGCAAGAGCCTGTCGTTCCGCACACGCGGACGCGATACGATGCAGGGCAGGGAAGCCGTGATCTATGCCATCGACCCTGCGGTCGAAGCGAGTACGCGTACGCTGAAGATCCGCGCTCGCTGCAAGGATTCCCGTGGTCTCGTCGCAGGAATGTTCGCCGACATCAATCTTCCCCTGTCTACGGTGAGCGATGCCCTGCTCGTCCCGACCGAGGCCATCGTACCCGACCTCAACGGAACGAAGATCTTTGTCCAGCGCGGCGGCGTGGCCCGCCCAGTCTTCGTCGAAACGGGTGGCCGCACCCCAACGATGGTGAGGATCTCGTCCGGTATCGCCGCAGGCGATACGGTGCTGACGACGGGTCTGCTGCTGCTCAAGCCCGGTTTACCTGTCAAGACGGAGTTGTGA
PROTEIN sequence
Length: 361
MNKKVLIWTIVVAVAIGAFFLIRSLTGTSAARGPGAGTPPGGPGGVKAGPVSVRGIVVQPSSFDESITLTGSIMANESVEIRSEVSGRIIKLGFQEGGLVRKGQLLVKLFDADLRAQLAKARQQLKIDEDKMRRYAELKRVDGVSTEEYEVAAAQVEMRKAEIDVLLAQISRTEILAPFSGRIGLRQVSDGAVITTNTLIAVLADEQQLKLECSIPERYASTVALGKSLSFRTRGRDTMQGREAVIYAIDPAVEASTRTLKIRARCKDSRGLVAGMFADINLPLSTVSDALLVPTEAIVPDLNGTKIFVQRGGVARPVFVETGGRTPTMVRISSGIAAGDTVLTTGLLLLKPGLPVKTEL*