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scnpilot_p_inoc_scaffold_179_curated_155

Organism: scnpilot_dereplicated_Magnetospirillum_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(149708..150724)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059, ECO:0000313|EMBL:CDK97277.1};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR similarity UNIPROT
DB: UniProtKB
  • Identity: 98.2
  • Coverage: 338.0
  • Bit_score: 661
  • Evalue 8.20e-187
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 92.3
  • Coverage: 338.0
  • Bit_score: 620
  • Evalue 3.60e-175
DNA-directed RNA polymerase subunit alpha n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U4G5_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 98.2
  • Coverage: 338.0
  • Bit_score: 661
  • Evalue 5.90e-187

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Taxonomy

Magnetospirillum gryphiswaldense → Magnetospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1017
GTGATTCAGAAGAACTGGCAGGAATTGATCAAGCCCTCGAAGCTGCAGGTGGAACCCGGTGCCGATGTGGCCCGTGTTGCGACTGTGGTCGCCGAACCGCTGGAACGCGGCTTCGGCATGACGCTGGGCAACTCCTTGCGCCGTGTGTTGTTGTCCTCGCTCCAGGGTGCCGCGGTTACCGCCATCCAGATCGAAGGCGTGCTGCACGAATTCTCGTCCGTTCCGGGTGTGCGCGAAGATGTCACCGACATCATCCTGAACATCAAGAACCTCGGCCTGCGCATGCATGGCGAGGGCCCCAAGCGCATGCAGCTGCGTGCGACCGGCCCCGGCGAGGTCAAGGCCGGCATGATCGAAGCCGGTCACGACATCGAGATCATGGACCCCGACCTGGTGCTGTGCACCCTGGATCAGGGCGCCAAGCTGAACATCGAATTCACGGTCGAGACCGGCAAGGGCTATGTGCCCGCGTCGCAGAACCGCACCGAGGATTCGCCCATCGGCCTGATCCCCATCGACGCCATCTTCTCGCCGGTCAAGAAGGTCGCCTACAAGGTGGAAAACACCCGCGTGGGTCAGGTCACCGACTACGACAAGCTGTCCATGGTGGTCGAGACCAACGGCGCCGTTTCCCCCGATGACGCGGTGGCCCTGGCGGCGCGCATCCTGCAGGACCAGTTGCAGCTGTTCATCAACTTCGACGAACCGACCCATGTGGTCGAGGAAGAGAAGAAGGACGAACTGCCCTTCAACAAGAACCTGCTGCGCAAGGTGGATGAACTGGAACTGTCGGTTCGTTCGGCCAATTGCCTGAAGAACGACAACATCATCTATATCGGTGACCTGGTCCAGAAGACCGAAGCCGAGATGCTGCGGACCCCGAACTTCGGCCGCAAGTCCCTGAACGAGATCAAGGAAGTGCTCTCGCACATGGGTCTGCACTTGGGTATGGAAATCCCCAACTGGCCGCCGGAGAACATCGAGGACCTGGCGAAGAAGCTGGAAGAACCTTATTGA
PROTEIN sequence
Length: 339
VIQKNWQELIKPSKLQVEPGADVARVATVVAEPLERGFGMTLGNSLRRVLLSSLQGAAVTAIQIEGVLHEFSSVPGVREDVTDIILNIKNLGLRMHGEGPKRMQLRATGPGEVKAGMIEAGHDIEIMDPDLVLCTLDQGAKLNIEFTVETGKGYVPASQNRTEDSPIGLIPIDAIFSPVKKVAYKVENTRVGQVTDYDKLSMVVETNGAVSPDDAVALAARILQDQLQLFINFDEPTHVVEEEKKDELPFNKNLLRKVDELELSVRSANCLKNDNIIYIGDLVQKTEAEMLRTPNFGRKSLNEIKEVLSHMGLHLGMEIPNWPPENIEDLAKKLEEPY*