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SCNpilot_cont_1000_bf_scaffold_91_curated_89

Organism: scnpilot_dereplicated_Mesorhizobium_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(106583..108898)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1287256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC372A00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.5
  • Coverage: 774.0
  • Bit_score: 1346
  • Evalue 0.0
ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 87.9
  • Coverage: 774.0
  • Bit_score: 1344
  • Evalue 0.0
  • rbh
ribonuclease R n=1 Tax=Rhizobium loti RepID=UPI00036991F9 similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 774.0
  • Bit_score: 1347
  • Evalue 0.0

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Taxonomy

Mesorhizobium sp. LNJC372A00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2316
GTGGCGCGCAGGATCTCCGGACGAAGCCACGGCGATCCGCGCGGCGCCGACACCAGGACAAGGGACACGAGGGCCAAGGTCAAGGATGACTACCGGCCCTCGCGTGACGAGATTCTTCGTTATATCGCCGAGAATCCTGACCGCGCCGGCAAGCGGGAGATCGCCAAGGCCTTCGCCCTGCGCGGCGAGGACCGGATGTGGCTGAAGGACATGCTGCGCGACCTGCAGGACGACGGCCTGCTGACCAAGCAACGCAAGCGGCTCACGCGTGCCGGAACGCTGCCGCACGTCGCGGTGCTCGAGGTTTTCGGGCGCGACGCAGACGGACTGCTGCTCGCGCGCCCGGTCGAACATGACAGCGATGAGCCGCCGCCGGTCGTCTCGATCCGCGTTTCGCGCGGCAACGGCCAGGCGCCCGGCATCGGCGATCGCGTGCTGGCCAAGACCTTCCCGACCGAGGCCGTCACCGGCCCGGCCTATACCGGCCGGGTGATGAAGATATTCGAGAAGCGCGGCGATGCCGTTCTCGGTGTCTTCCGCGTTCTCAAGGACGGCAGCTTCCGCATCGAGCCGGTCGAGCGCCGGCAGCCCGAACTTATCGTCGACAAGGAATTCCAGAACGGCGCAAGGAACGGCGATCTCGTCGAGGTGGAGCCCGAGCGTGCCTCCCGCTACGGCCTGCCCCGCGCGAAAGTGCTGAGCGTGCTCGGCTCGCTGACGAGCGAGAAGGCGGTCTCCATGATCGCCATCCATGCGCACGACATTCCGCATGTCTTCCCGGCCGATGTGATCGCCGAAGCCGAAGCGGTGAAGCCGGCGACAATGGCCAACCGCGAGGACTGGCGTGACCTGCCGCTGGTCACGATCGACCCGGCGGATGCCAAGGATCATGACGACGCGGTCTTCGCCACGCCGGATCCGGACGAGAGCAACCCTGGCGGCGTCATCGCCACGGTGGCCATCGCCGACGTCGCCGCCTATGTCCGCTACGGCAGCCCGCTCGACCGCGAGGCGCTGAAGCGGGGCAATTCGGTCTATTTCCCGGACCGCGTTGTGCCGATGCTGCCGGAGCGCATCTCCAACGATCTCTGTTCGCTGCGCGAGGGCGAGGATCGGCCGGCGCTCGCCGTGCGCATGACCTTCTCGGCCGAAGGCCGAAAGATCAGGCACAGCTTTCACCGCGTCATAATGAAATCCGCCGCCAAGCTTGCCTACCAGCAGGCGCAGGCCGCGATCGACGGCGCTCCGGACGACAAGACCCGCCCCATCATCGAGGCGGTGCTCAAGCCGCTATGGGACGCCTATGCCGTGCTCAGGCGCGGCCGCGACTCACGCCAGCCCCTCGAACTCGACCTGCCCGAACGCAAGATCCTGCTGAAGGCGGACGGCACGGTCGACAGCGTGGTCGTGCCGGAGCGACTGGACGCGCACAAGCTCATCGAAGAGTTCATGATCCAGGCCAACGTCGCCGCCGCCGAGACGCTGGAAGCGAAGAAGCAGTCGCTGGTCTATCGCATTCACGATGCGCCGTCGCTCGCCAAGCAGGAATCGCTGCGCGAATTCTTACAGACGATCGGCTTGTCGCTGGCGCGCGGGGCGCAGATGCGGCCGAGCCAGTTCAACGGCATCCTTGAGCGCGTGCGCGGCGCCGACAACGAATCCCTCGTCAACGAGGTGGTCCTGCGCTCGCAGAGCCAGGCGGAATATTCGCCGAGGAACATCGGCCATTTCGGCCTCAACCTCAGGCGCTATGCGCACTTCACCTCGCCCATCCGTCGTTATGCCGACCTGATCGTGCATCGCGGGCTGATCGCCGCGCTCGGCCTCGGCCCAGGTGGCCTCACGCAGGAAGAGGAAGCCCGGCTGGAGGAGATCGCCGTTCAGATCTCGGCGACCGAGCGCCGCGCAATGGCGGCCGAACGCGACACCGTCGATCGCCTTGTCGCCGCTTATCTCGCGGAGCGAGTGGACGAGCGATTCGATGCCCGCGTTTCCGGCGTCACCAAATCGGGACTCTTTGTCCAATTGCCGCAATTCGGCGCCGATGGTTTCATCCCGGTGTCGACGCTGGGCGGTGACTACTACATATATGACGAGGCTGCGCATTCGCTGTTTGGCGAGCGCTCCGGCAAGGGCTACCAGTTGGCGGATCGCGTCGAGGTCCGTCTCGTCGAGGTGGCACCGATGGCCGGCGCCATGCGCTTCGAGATGTTGAGCGACCCGAAGCCGCTGCCCGGCTCGAAGCGGTCGTTCCACAAGTCAAAGAAGGGTCGGGCCCGCGCGTCGCAACCGCGCCCGCGCGGCAGGAGACGGTAG
PROTEIN sequence
Length: 772
VARRISGRSHGDPRGADTRTRDTRAKVKDDYRPSRDEILRYIAENPDRAGKREIAKAFALRGEDRMWLKDMLRDLQDDGLLTKQRKRLTRAGTLPHVAVLEVFGRDADGLLLARPVEHDSDEPPPVVSIRVSRGNGQAPGIGDRVLAKTFPTEAVTGPAYTGRVMKIFEKRGDAVLGVFRVLKDGSFRIEPVERRQPELIVDKEFQNGARNGDLVEVEPERASRYGLPRAKVLSVLGSLTSEKAVSMIAIHAHDIPHVFPADVIAEAEAVKPATMANREDWRDLPLVTIDPADAKDHDDAVFATPDPDESNPGGVIATVAIADVAAYVRYGSPLDREALKRGNSVYFPDRVVPMLPERISNDLCSLREGEDRPALAVRMTFSAEGRKIRHSFHRVIMKSAAKLAYQQAQAAIDGAPDDKTRPIIEAVLKPLWDAYAVLRRGRDSRQPLELDLPERKILLKADGTVDSVVVPERLDAHKLIEEFMIQANVAAAETLEAKKQSLVYRIHDAPSLAKQESLREFLQTIGLSLARGAQMRPSQFNGILERVRGADNESLVNEVVLRSQSQAEYSPRNIGHFGLNLRRYAHFTSPIRRYADLIVHRGLIAALGLGPGGLTQEEEARLEEIAVQISATERRAMAAERDTVDRLVAAYLAERVDERFDARVSGVTKSGLFVQLPQFGADGFIPVSTLGGDYYIYDEAAHSLFGERSGKGYQLADRVEVRLVEVAPMAGAMRFEMLSDPKPLPGSKRSFHKSKKGRARASQPRPRGRRR*