ggKbase home page

SCNpilot_cont_1000_bf_scaffold_599_curated_116

Organism: scnpilot_dereplicated_Mesorhizobium_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(91647..91916)

Top 3 Functional Annotations

Value Algorithm Source
Putative conjugal transfer protein trbD n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ET07_BRASB similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 89.0
  • Bit_score: 181
  • Evalue 2.80e-43
conjugal transfer protein TrbD; K03198 type IV secretion system protein VirB3 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 89.0
  • Bit_score: 181
  • Evalue 8.70e-44
Putative conjugal transfer protein trbD {ECO:0000313|EMBL:ABQ39301.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 89.0
  • Bit_score: 181
  • Evalue 3.90e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium sp. BTAi1 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
ATGGAGCAAGATGGCGCCATCGCCGGCTTCTATGCGCCCGTTCACCGAGCGTTGACCGAGCCGATCCTCTTGGGCGGCGCGCCGCGCGCCGTGGCGATCGTGAACGGCACGCTTGCTGCCGCGATCGGGCTCGGTCTTCGGCTCTGGATCGTGGGCGGCCTCATCTGGCTTGTCGGTCACATCGCCGCCGTTTGGGCGGCGAAGCGTGACGCCGCCTTCGTCGACGTCGTGCGTCGGCATCTGCGTTATCCGCAGCACATGGTCTCGTGA
PROTEIN sequence
Length: 90
MEQDGAIAGFYAPVHRALTEPILLGGAPRAVAIVNGTLAAAIGLGLRLWIVGGLIWLVGHIAAVWAAKRDAAFVDVVRRHLRYPQHMVS*