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SCNpilot_expt_1000_bf_scaffold_537_curated_20

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: 21709..21948

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI000369EB3E similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 72.0
  • Bit_score: 76
  • Evalue 1.90e-11
Transcriptional regulator, XRE family (Modular protein) {ECO:0000313|EMBL:CCH77531.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 76.0
  • Bit_score: 108
  • Evalue 4.80e-21
putative transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 50.7
  • Coverage: 69.0
  • Bit_score: 74
  • Evalue 2.30e-11

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Taxonomy

Tetrasphaera japonica → Tetrasphaera → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 240
GTGCGTGCTTACCGTCTGCGTGAAATCCGCGAGGATCGCGGTATCGCACAGAAGGAGCTCGCCGACCGAATGGCGCTCACTCAGCCGACCATCTCTGCGCTCGAGGCCGGCGATCTCGACCTGTCCGGGCTCGCAACCCTGCCTGCGTACGTTGAAGTGCTCGGCGGTATTGTCGAGGTCGTCGCGACGTTCGGCGAACGCCGGATCGTGCTGTCCTCGGGCGAGCCGACGGCTGCGTAA
PROTEIN sequence
Length: 80
VRAYRLREIREDRGIAQKELADRMALTQPTISALEAGDLDLSGLATLPAYVEVLGGIVEVVATFGERRIVLSSGEPTAA*