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SCNpilot_expt_1000_bf_scaffold_1007_curated_20

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: 15839..16156

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000306B263 similarity UNIREF
DB: UNIREF100
  • Identity: 54.8
  • Coverage: 104.0
  • Bit_score: 114
  • Evalue 8.30e-23
ECF RNA polymerase sigma factor SigJ {ECO:0000313|EMBL:KJL34278.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.0
  • Coverage: 104.0
  • Bit_score: 152
  • Evalue 3.90e-34
ECF subfamily RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 49.0
  • Coverage: 104.0
  • Bit_score: 94
  • Evalue 1.60e-17

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Taxonomy

Microbacterium azadirachtae → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 318
ATGGACGTGCTGGCGCCGGACGTGGTGTCGACCACCGACAGCGGCGGCCTGGTGCGCCACGCCGCCCGTCGCCCGCTCTTCGGCGCGGACAGGGTGGTGGCGTTCCTGCGCGGCAGCATCGCCAAGCTCGACATCGCCTACCGGGTGTCCGCGATGACCGTCAACGGCCGGCTCGCGGCGCGGATCGAGGTCGGCGGCGTGCTGATGGCGGCGGTGAGCTTCGAGGTCGAGGACGGGCGCATCTCCCGGGTGTTCTCGATGGCCAATCCGCGCAAGCTCGAGGCTCTGGGAGCTGAGACCGTGCTCGCGCGAGGCTGA
PROTEIN sequence
Length: 106
MDVLAPDVVSTTDSGGLVRHAARRPLFGADRVVAFLRGSIAKLDIAYRVSAMTVNGRLAARIEVGGVLMAAVSFEVEDGRISRVFSMANPRKLEALGAETVLARG*