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scnpilot_p_inoc_scaffold_1899_curated_6

Organism: scnpilot_dereplicated_Microbacterium_7

near complete RP 45 / 55 MC: 4 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 4740..5423

Top 3 Functional Annotations

Value Algorithm Source
Response regulator receiver n=2 Tax=Microbacterium RepID=H8E5Z1_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 227.0
  • Bit_score: 443
  • Evalue 9.90e-122
XRE family transcriptional regulator {ECO:0000313|EMBL:EXJ52347.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 227.0
  • Bit_score: 443
  • Evalue 1.40e-121
response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; K07776 two-component system, OmpR family, response regulator RegX3 similarity KEGG
DB: KEGG
  • Identity: 85.0
  • Coverage: 227.0
  • Bit_score: 380
  • Evalue 3.20e-103

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Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 684
ATGACCCGCGTCCTGATCGTCGAGGATGAGCCCGATCTGGCCGATCCGCTCGCCTATCTGCTGCGCCGTGAGGGATTCGAGGTCGAGATCGCCGAGGACGGCCCCGCGGCCCTCGATGCGTTCGCCTCGCGCGGCGCCGACATCATCCTGCTCGACCTCATGCTCCCGGGGATGCCGGGAACCGAGGTGTGCCGTGTGGTGCGCTCGACCTCCAAAGTGCCCATCATCATGCTGACAGCGAAGGACTCCGAGGTCGATATCGTCGTCGGTCTCGAGCTGGGCGCTGACGACTACGTGACGAAGCCCTACTCGTCGCGCGAGCTGCTCGCGCGGATGCGGGCGGTGCTGCGACGCAGCGAAGGACCCGAGCTGGGGCTGGACGACAGCGTCGTCGACGGCGGAAGGGTCGTGCTGGACATCGACCGGCACACCGTCGCCGTCGACGGTGAGACCATCCCGATGCCGCTGAAGGAGTTCGAGCTGCTCGAGGTGCTCATGCGCAACGCGGGGCGCGTGCTGACGCGCGGCCAGCTGATCGACCGGGTCTGGGGGAGCGACTACTTCGGCGACACCAAGACGCTCGACGTGCACATCAAGCGCATCCGGTCACGGATCGAACGCAATCCGAGCGAGCCGGTCATGCTCCTGACCGTACGCGGGCTCGGCTACCGCTTCGAAGCCTGA
PROTEIN sequence
Length: 228
MTRVLIVEDEPDLADPLAYLLRREGFEVEIAEDGPAALDAFASRGADIILLDLMLPGMPGTEVCRVVRSTSKVPIIMLTAKDSEVDIVVGLELGADDYVTKPYSSRELLARMRAVLRRSEGPELGLDDSVVDGGRVVLDIDRHTVAVDGETIPMPLKEFELLEVLMRNAGRVLTRGQLIDRVWGSDYFGDTKTLDVHIKRIRSRIERNPSEPVMLLTVRGLGYRFEA*