ggKbase home page

scnpilot_p_inoc_scaffold_2951_curated_2

Organism: scnpilot_dereplicated_Microbacterium_7

near complete RP 45 / 55 MC: 4 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 1157..1411

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 84.0
  • Bit_score: 170
  • Evalue 8.50e-40
rpoZ; DNA-directed RNA polymerase, subunit K/omega; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 96.4
  • Coverage: 84.0
  • Bit_score: 166
  • Evalue 4.70e-39
DNA-directed RNA polymerase subunit omega n=2 Tax=Microbacterium RepID=H8E9X0_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 84.0
  • Bit_score: 170
  • Evalue 6.00e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium laevaniformans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 255
ATGGCCGGACGTGACAAGGGCATCATCGACCCGCCCATCGACGCGCTGCTCGACAAGGTCGACTCCAAGTACCAGCTCGTGATCTACGCGTCCAAGCGGGCACGTCAGATCAACGACTACTACTCCGATCTGCACGAGGGCAACCTCTTCGACAACGTCGGTCCGCTCGTCGACTCGAGCGTCGAGGACAAGCCGCTCACGATCGCGCTGCACGAGATCCACGAGGACAAGCTGCGCCTGCGCGCGGCGGAGTGA
PROTEIN sequence
Length: 85
MAGRDKGIIDPPIDALLDKVDSKYQLVIYASKRARQINDYYSDLHEGNLFDNVGPLVDSSVEDKPLTIALHEIHEDKLRLRAAE*