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scnpilot_p_inoc_scaffold_4164_curated_9

Organism: scnpilot_dereplicated_Microbacterium_7

near complete RP 45 / 55 MC: 4 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(7816..8430)

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 204.0
  • Bit_score: 399
  • Evalue 2.70e-108
ligA; NAD-dependent DNA ligase; K01972 DNA ligase (NAD+) [EC:6.5.1.2] similarity KEGG
DB: KEGG
  • Identity: 79.4
  • Coverage: 199.0
  • Bit_score: 315
  • Evalue 1.50e-83
DNA ligase n=2 Tax=Microbacterium RepID=H8E4I4_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 204.0
  • Bit_score: 378
  • Evalue 4.60e-102

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Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 615
CTCACAGGTCCCCAGCCGTCGGCCCAGGCGCTCACCCTTCTCGAGGAACTCGAGAAGGCCAAGACGAAGGACCTGTGGCGGTTTCTGGTCGCGTTGAACATCCGCCACGTCGGCCCGGTCGCCGCGCGGGCACTCGCGCAGTGGTTCGGTTCGCTGGACGCGATCCGCGCGGCCGAGCGCGACGCTCTCGCCGACGTCGACGGCGTCGGCGGCATCATCGCGGACTCGCTCCTGGAATGGTTCGCCGTCGACTGGCATCAGGAGATCGTGGAACGCTGGGCGGCGGCGGGCGCGGTCTTGGAGATTCCAGGTCACCCCGGCCCGGGAGCTGCCGTCGCCGCCGGCGGCGTGCTCGAGGGTGTCACGGTCGTTGCGACCGGCACGCTGGAGGGCTACACCCGAGAGGGCGCGCAGGAGGCGATCATTGCCGCTGGCGGGAAAGCAGCCTCTTCCGTGTCGAAGAAGACCGACTTCGTCGCCGCAGGCCCGGGCGCGGGCTCGAAACTCGCCAAGGCGGAGGAACTCGGCATCCGCATCATCGATGCCGCGCAGTTTCGCATCCTCGTCGAGCAGGGGCCCGCCGCGCTCGGGGCACTCGATCCCGACGCGGGCTGA
PROTEIN sequence
Length: 205
LTGPQPSAQALTLLEELEKAKTKDLWRFLVALNIRHVGPVAARALAQWFGSLDAIRAAERDALADVDGVGGIIADSLLEWFAVDWHQEIVERWAAAGAVLEIPGHPGPGAAVAAGGVLEGVTVVATGTLEGYTREGAQEAIIAAGGKAASSVSKKTDFVAAGPGAGSKLAKAEELGIRIIDAAQFRILVEQGPAALGALDPDAG*