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scnpilot_p_inoc_scaffold_2826_curated_1

Organism: scnpilot_dereplicated_Microbacterium_7

near complete RP 45 / 55 MC: 4 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(2..1438)

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 479.0
  • Bit_score: 947
  • Evalue 6.20e-273
ligA; NAD-dependent DNA ligase; K01972 DNA ligase (NAD+) [EC:6.5.1.2] similarity KEGG
DB: KEGG
  • Identity: 76.0
  • Coverage: 487.0
  • Bit_score: 736
  • Evalue 4.90e-210
DNA ligase n=2 Tax=Microbacterium RepID=H8E4I4_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 93.3
  • Coverage: 479.0
  • Bit_score: 893
  • Evalue 7.60e-257

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Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1437
GTGACGGATGATGAAGTCTCCCTTCCGACGAACCTCGACGACGCCCGCCTCGACGCGGAGCGATTGACCGACCTCATCCTCGGCGCCCGCGACGCGTACTACGGGCGCGACGCCGAGATCGTCGACGACGCGACCTACGACGGGTGGGTGCGGCGGCTCGAAGCAGTGGAGCGCGCCTTCCCCGAGGTGCAGGGACAGGATTCGCCGACGCAGTCGGTGGGCGCGGCGCAGAGCTCGATGTTCGCGCCCGTCGAACACGCCGAGCGCATGCTCAGCCTCGACAACGTCTTCAGCGCGGACGAGCTGCGAGACTGGTGCACGAAGACATCGGCTGCCGCGGGACGACACGTCCGTTGGCTGCTGGAGCTGAAGATCGACGGCCTGGCCATCAATCTCCGCTACGAGCACGGCGTTCTCGTGTCGGCCGCCACCCGCGGCGACGGCCGGGTGGGCGAGGACGTCACCGTCAATGCGCTCCAGGTCGCGGGCATTCCTGCACGACTCGCGGGTGAAGGGCATCCTCCGATCGTGGAGGTGCGCGGCGAGGTCTACATCCCCGTCGCGGCCTTCGACGAACTCAACGCTCTCCAGGCCCGGTTGCGCGAGCGTGTCATCACGGACGGTCGTGAGCGCGGAGGCGACGAGGAGAAGCTCACCCGAAGCGCCGCCCGCCGATTCCCGGCATTCGCGAACCCGCGAAACGCGGCCAGCGGCGGCCTTCGCCAGCAACTCGACAAGAAAAGCGGCATGGAGCTCGAAGCCGGACGCGCCCGGCTCGCATCGCTGCGGCTGCTCGTCCATGGGATCGGGGCGTGGCCGGAGCCGCCCGTGTCCTCGCAGAGCGAGGTCTACGCCCTGCTCGCGACGTGGGGGCTGCCGACGAGCACGTCTTTCCGCACCGCGGACGACATCGACGGCGTGGCGGCGTTCGTCGCGTACTACGGCGAGCATCGCCACGACGTCGAGCACGAGATCGACGGCGTCGTGGTCAAGGTCGATGAGCTGGCGCTGCACGGTGAGCTGGGCGCGACCAGTCGTGCCCCGCGATGGGCCATCGCGTACAAGTACCCGCCGGAGCAGGTCAACACGAAGCTGCTGGACATCGTCGTCTCGGTCGGCCGCACCGGCCGGGCGACACCCTTCGCCGTGATGGCCCCCGCCCGCGTCGCGGGCTCGGTCGTCCGGCAGGCGACGCTTCACAACCAGGACGTCGTCGTGTCCAAAGGAGTTCTCATCGGTGACACCGTCGTGCTGCGCAAAGCCGGCGATGTCATTCCCGAGGTGCTCGGTCCCGTGGTCGAGCTGCGCGACGGCACGGAGCGGGCATTCGTCATGCCGACCCGGTGCCCGGAATGCGGCTCGACGCTGGCACCCGCGAAAGACGGCGACATCGACCTGCGCTGCCCCAACACGCGCGCCTGTCCCGCCCAGGTGCGG
PROTEIN sequence
Length: 479
VTDDEVSLPTNLDDARLDAERLTDLILGARDAYYGRDAEIVDDATYDGWVRRLEAVERAFPEVQGQDSPTQSVGAAQSSMFAPVEHAERMLSLDNVFSADELRDWCTKTSAAAGRHVRWLLELKIDGLAINLRYEHGVLVSAATRGDGRVGEDVTVNALQVAGIPARLAGEGHPPIVEVRGEVYIPVAAFDELNALQARLRERVITDGRERGGDEEKLTRSAARRFPAFANPRNAASGGLRQQLDKKSGMELEAGRARLASLRLLVHGIGAWPEPPVSSQSEVYALLATWGLPTSTSFRTADDIDGVAAFVAYYGEHRHDVEHEIDGVVVKVDELALHGELGATSRAPRWAIAYKYPPEQVNTKLLDIVVSVGRTGRATPFAVMAPARVAGSVVRQATLHNQDVVVSKGVLIGDTVVLRKAGDVIPEVLGPVVELRDGTERAFVMPTRCPECGSTLAPAKDGDIDLRCPNTRACPAQVR