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scnpilot_p_inoc_scaffold_532_curated_36

Organism: scnpilot_dereplicated_Microbacterium_7

near complete RP 45 / 55 MC: 4 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 39935..40663

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor n=2 Tax=Microbacterium RepID=H8E1N6_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 96.7
  • Coverage: 243.0
  • Bit_score: 462
  • Evalue 2.20e-127
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:KIC58274.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 242.0
  • Bit_score: 477
  • Evalue 9.20e-132
sigH; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 75.4
  • Coverage: 236.0
  • Bit_score: 351
  • Evalue 2.20e-94

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Taxonomy

Microbacterium hominis → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 729
GTGACCGCGACACTCGCACCCCTGGTGCCGGACATCGCCGACGTAGACTGGGCCCTGATGGAAGAGCACGCGGCCCTCGAGTCGCCGACCCCCGAAACCCCGGCCACAGACCTCGTCCCGGCGGACGAGGTCGACAGCGCCGCGGACGCCCGTGCGCAGTTCGAGCAGCAGGCGCTGCCGTTCATGGATCAGCTGTACGCCGCGGGCATGCGGATGACGCGCAACCCGGCGGATGCGGCCGATCTGGTGCAGGAGACGTTCGTCAAGGCCTTCGCATCCTGGTCCTCTTTCACGCAGGGCACGAACCTCAAGGCGTGGCTGTACCGCATCCTGACGAACACGTACATCAACACGTACCGCAAGAAGCAGCGCGAGCCCTATCAGGGCACGATCGACGATCTCGAGGACTGGCAGCTCGGCGGCGCGGAGTCCACGACAGCCACCAGGAGCCGCTCGGCGGAGGCGGAGGCGATCGACCACATGCCGGCATCCGCGGTCAAGGACGCGCTGCAGTCGATTCCGGAGGATTTCCGTCTCGCGGTGTACCTCGCCGACGTCGAGGGCTTCGCGTATCAGGAGATCGCGGACATCATGAAAACCCCCATCGGCACGGTCATGAGCCGCCTGCATCGTGGCAGGCGCATGCTGCGTGACCTCCTCGCCGACTACGCGCGCGAGCGCGGCATGGACGTGCCGGTGCCCGCGACTTCATCAGGGAGCAAGAAATGA
PROTEIN sequence
Length: 243
VTATLAPLVPDIADVDWALMEEHAALESPTPETPATDLVPADEVDSAADARAQFEQQALPFMDQLYAAGMRMTRNPADAADLVQETFVKAFASWSSFTQGTNLKAWLYRILTNTYINTYRKKQREPYQGTIDDLEDWQLGGAESTTATRSRSAEAEAIDHMPASAVKDALQSIPEDFRLAVYLADVEGFAYQEIADIMKTPIGTVMSRLHRGRRMLRDLLADYARERGMDVPVPATSSGSKK*