ggKbase home page

SCNpilot_cont_300_bf_scaffold_26110_curated_1

Organism: scnpilot_dereplicated_Microbacterium_2

near complete RP 51 / 55 BSCG 50 / 51 MC: 3 ASCG 11 / 38
Location: 1..1404

Top 3 Functional Annotations

Value Algorithm Source
Lipid A core-O-antigen ligase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NBQ2_MICTS similarity UNIREF
DB: UNIREF100
  • Identity: 68.7
  • Coverage: 466.0
  • Bit_score: 659
  • Evalue 3.10e-186
lipid A core - O-antigen ligase similarity KEGG
DB: KEGG
  • Identity: 68.7
  • Coverage: 466.0
  • Bit_score: 659
  • Evalue 9.70e-187
Lipid A core-O-antigen ligase {ECO:0000313|EMBL:BAJ73512.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.7
  • Coverage: 466.0
  • Bit_score: 659
  • Evalue 4.30e-186

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium testaceum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1404
ATGGCCGTCTTCTCGAAGCATCCCGTGTCGCCACCGCCCGCGGCGCCGGTGCGCGAGAAGACGGGGCATCTGATGCTGCGCGGCTGGTGCATCTTCGTACTGTTCCTCGCGTTGTCCGGAGTGGCGTGGGTCAACGCGATCGGGACTGTCGCCGCCTGCGCCCTCCTCGGCGCGTCCGCTCTCGTATCGGTGGCGCTGTGGATCGTCCTCCGCCCGCCCGTGCAGTGGCGACGCCTGCCGTGGTTCCCGCTCGCCTACGCGCTGTGGGCCGGACTGTCCCTGCTGTGGTCGCAGTGGCCCGGCGCGTCCGCGCTGACCTGGCTGATGCTCCTGATCACCACGACCCAGGGCCTCTTCGTCGCGGCGGCGCTGACGTGGCACGAGCTGGTCCGTGGGATCGCCTCGGCGCTCAAGTGGTGCCTGGGGCTGTCGCTCGTCTTCGAGCTGTGGGTGTCGGTCGTGGTGCGCGGTCCGATCCTTCCCGAGTTCCAGCGGCCCACCCACTCCGTGAACCCGATCGTCTACTGGTCGCGGGACAACCTCTTCGACGGCGGCCGCATCCAGGGGATCTGGGGCAACGCGAACCTCCTCGCCGCCGTGTGCCTGGTGGCGATCATCGTGTTCGCGATCCGGATCGCGGCGCGCGCGCCCCGCCGGACGCTGCTGTGGGTCTGGATGGCGCTGGCAGCCTTCCTGCTGTACCGCGCCGATTCGGCGACCGTGTACGTCTCGGCCGTCATGGCCGCCGTCGTGCTCGCCACCGTCCTCCTCATGCGCACGGCCCGCACGCCGGGGGCGCGCACGCTGCTCTACTCCCTGTACGCCGTGATCGGGCTCGGCGGCGCGCTGGCGGTATGGCTCCTGCGTGACATCGTCTTCGCGCTCCTCGGCCGCTCCGCCAACCTCACCGGTCGTCAGAGCATCTGGGCGCACGTCCTGGAGCGCGCGGTGCAGCGCCCGGTGGCCGGCTGGGGCTTCGCCACCCCGTGGATCGCGACCGACTCTCACTTCGACGGCTGGATCACCGACCACGGGCAGACGGTCATGCAGGCCCACAACGTCTGGATCGACGTGTTCCTGCAGCTCGGCGCAGTGGGGGTCGTGCTCCTCGCCCTCACGTACCTCGCCTTCCTCTGGCGCTCGTGGTTCTTCGCGGTAGACCGCCCGCGCTGGGATCTTCGAGCGGACCGCCCCTACTCGGCGCTGACCCTGCTGCCGACCCTCGTCGGGACCGTGCTGATCGTCCAGGGTGTCTCCGAATCCGAGCCGCTCCTGCTCTGGGGCTGGATGTTCGTGGTCATGCTGGGCTTCAAGATCAAGCAGGCGCCGCTGGTCGGTGTCGGTCCGGCGGAGCAGTCGCTGGCCATCGAGCGCGGCGAGCTCAACCCCGAGCGAGCGCCGTGA
PROTEIN sequence
Length: 468
MAVFSKHPVSPPPAAPVREKTGHLMLRGWCIFVLFLALSGVAWVNAIGTVAACALLGASALVSVALWIVLRPPVQWRRLPWFPLAYALWAGLSLLWSQWPGASALTWLMLLITTTQGLFVAAALTWHELVRGIASALKWCLGLSLVFELWVSVVVRGPILPEFQRPTHSVNPIVYWSRDNLFDGGRIQGIWGNANLLAAVCLVAIIVFAIRIAARAPRRTLLWVWMALAAFLLYRADSATVYVSAVMAAVVLATVLLMRTARTPGARTLLYSLYAVIGLGGALAVWLLRDIVFALLGRSANLTGRQSIWAHVLERAVQRPVAGWGFATPWIATDSHFDGWITDHGQTVMQAHNVWIDVFLQLGAVGVVLLALTYLAFLWRSWFFAVDRPRWDLRADRPYSALTLLPTLVGTVLIVQGVSESEPLLLWGWMFVVMLGFKIKQAPLVGVGPAEQSLAIERGELNPERAP*