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SCNpilot_cont_300_bf_scaffold_12651_curated_1

Organism: scnpilot_dereplicated_Microbacterium_2

near complete RP 51 / 55 BSCG 50 / 51 MC: 3 ASCG 11 / 38
Location: 1..2835

Top 3 Functional Annotations

Value Algorithm Source
rpoC; DNA-directed RNA polymerase, beta' subunit/160 kD subunit; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 94.5
  • Coverage: 945.0
  • Bit_score: 1762
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.5
  • Coverage: 945.0
  • Bit_score: 1762
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035C65CB similarity UNIREF
DB: UNIREF100
  • Identity: 95.7
  • Coverage: 945.0
  • Bit_score: 1777
  • Evalue 0.0

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Taxonomy

Microbacterium testaceum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2835
CCGGTGATCCCGCCGGAGCTGCGCCCGATGGTGCAGCTGGACGGCGGCCGCTTCGCGACCTCCGACCTGAACGACCTGTACCGTCGCGTGATCAACCGCAACAACCGCCTCCGCCGTCTGATCGACCTCGGTGCCCCCGAGATCATCGTCAACAACGAGAAGCGGATGCTGCAGGAGGCCGTCGACGCGCTGTTCGACAACGGCCGTCGCGGCCGCCCCGTCACGGGCACGGGCAACCGCGCGCTCAAGTCCCTGAGCGACATGCTCAAGGGCAAGCAGGGCCGGTTCCGCCAGAACCTGCTCGGCAAGCGCGTGGACTACTCGGGCCGTTCGGTCATCATCGTCGGCCCGCAGCTGAAGCTGCACCAGTGCGGTCTGCCCAAGCAGATGGCGCTCGAGCTGTTCAAGCCGTTCGTGATCAAGCGCCTCATCGACCTCGGTCACTCTCAGAACATCAAGGCCGCCAAGCGCGCCGTGGAGCGCACCCGTCCCGAGGTGTGGGACGTGCTCGAGGAGATCATCCGCGAGCGCCCGGTGCTGCTCAACCGCGCGCCCACGCTCCACCGCCTCGGCATCCAGGCGTTCGAGCCCCAGCTCGTGGAGGGCAAGGCGATCCAGCTGCACCCGCTCGTGTGCGCCGCGTTCAACGCGGACTTCGACGGCGACCAGATGGCCGTCCACCTCCCGCTGTCGGTCGAGGCCCAGGCCGAGGCCCGCATCCTGATGCTGGCGTCGAACAACATCCTGAAGCCGTCCGACGGCCGCCCGGTGACCCTGCCCTCGCAGGACATGATCATCGGCCTGCACCACCTCACCACGGTCAAGGCGGGCGCAGCCGGCGAGGGCCGCGTGTTCGGCTCGGTCGGCGAGGCCATCCTGGCGAAGGACGAGGGCACCCTCGACCTGCAGGCCAAGGTCCGCATCCGCGTCCCCGGCCTCACGTTCCTCGAGGGCGAAGCGCCCGAGGGCTACGAGCGCCACGGTCTCGTGGACGCCTCGCTCGGCCAGGCGATCTTCAACGACACGCTGCCCAAGGGGTACCCGTTCGTGCGCGAGCAGGCCGACAAGGGCAAGCTGTCGCAGATCGTCAACAAGCTGGCCGAGGAGTACCCCCGCGTGGAGGTCGCCGCCTCGCTCGACCGCATCAAGGACGCCGGCTTCTACTGGGCCACGCGTTCGGGCGTGACGGTCGCGCTCAGCGACATCCTCACGCCACCGAACAAGGGCGAGATCGTCGCGGGCTACGAGAAGCAGGCCGCGAAGGTCCAGGCGCAGTACGAGAAGGGTCTGACCACCGACGCCGAGCGCCGGCAGGAGCTCATCAAGATCTGGACCGAGGCGACCGACGCCGTCCAGAAGGCGATGCGCGACAACTTCCCGGAGGACAACACCATCAACCGCATGGTGTCGTCGGGTGCTCGTGGTAACTGGCTGCAGATCCGGAACATCGCGGGTATGCGCGGCCTCGTGAACAACCCGAAGGGCGAGATCATCCCGCGCCCGATCATCTCCTCGTACCGCGAGGGGCTGTCGGTGGCGGAGTACTTCATCGCGACGCACGGTGCCCGCAAGGGTCTGGCCGACACGGCCCTCCGTACGGCCGACTCGGGCTACCTGACCCGTCGCCTGGTGGACGTCTCGCAGGATGTCATCATCCGCGAGGAGGACTGCGGCACGACCAAGGGCCTCGAGTTCACGATCGCCGCGCCCGGCGCGGACGGCACGCTCGTGCGTGACGCGAACGTCGAGAACTCGGTGTTCGCCCGCACGCTCGCGGCGGATGTCGTGGACGCCAAGGGCACGGTCGTCGCCGAGGCGGGCCAGGACGTCGGCGACGTTCTGATCGACCGCCTCGTGGAGGCCGGCGTCGAGAGCATCAAGGTGCGCTCGGTGCTGACGTGCGAGTCCGCCGTCGGCGTGTGCGCGAAGTGCTACGGCCGTTCGCTCGCGACCGGCAAGATCGTCGACATCGGCGAGGCCGTGGGCATCATCGCGGCGCAGTCGATCGGCGAGCCCGGCACGCAGCTGACGATGCGTACGTTCCACACCGGTGGTTCCGCCTCCGCTGAGGACATCACGCAGGGTCTGCCCCGTGTGCAGGAGCTCTTCGAGGCGCGCACCCCCAAGGGCGCGTCCCCGATCGCCGAGTCCGACGGACGCATCACGATCGACGAGACCGACCGTTCGAAGAAGGTCATCCTGACCCCCGACAACGGCGACGAGCCGATCGCCTACCCGGTGCTCAAGCGCGCCACGCTGCTCGTGGAGGACGGTCAGCACGTGACCGTCGGCCAGCCGCTGCAGGTGGGCACGCTCGACCCGAAGGAGATCATGCGCGTCATGGGCGCCCGCGAGGTGCAGAAGTACCTCGTCAACGGCGTGCAGGGCGTGTACCGGTCGCAGGGTGTGCCGATCCACGACAAGCACATCGAGGTCATCGTCCGGCAGATGCTGCGGAAGGTCACCGTGGTCGACCACGGCGACACGACGCTGCTGCCGGGTGAGCTCGTCGACTCGCGTCGCTTCATCGACCTGAACCGTCAGTCCGTCGGCGAGGGCAAGCGCCCCGCCTCGGGTCGGCCGGAGCTCATGGGTATCACGAAGGCGTCGCTCGCCACCGAGTCGTGGCTGTCGGCCGCGTCGTTCCAGGAGACGACGCGTGTCCTGACGCAGGCCGCGATGGAGGGCAAGAGCGACCCGCTCGTGGGCCTGAAGGAGAACGTGATCATCGGAAAGCTGATCCCGGCGGGCACCGGACTCTCGAAGTACCGGAACGTCACCGTGGAGGCGACCGAGGAGGCGAAGAGCGAGCGGTACCCCAACCGCATCTTCGCG
PROTEIN sequence
Length: 945
PVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLRRLIDLGAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGTGNRALKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLHQCGLPKQMALELFKPFVIKRLIDLGHSQNIKAAKRAVERTRPEVWDVLEEIIRERPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCAAFNADFDGDQMAVHLPLSVEAQAEARILMLASNNILKPSDGRPVTLPSQDMIIGLHHLTTVKAGAAGEGRVFGSVGEAILAKDEGTLDLQAKVRIRVPGLTFLEGEAPEGYERHGLVDASLGQAIFNDTLPKGYPFVREQADKGKLSQIVNKLAEEYPRVEVAASLDRIKDAGFYWATRSGVTVALSDILTPPNKGEIVAGYEKQAAKVQAQYEKGLTTDAERRQELIKIWTEATDAVQKAMRDNFPEDNTINRMVSSGARGNWLQIRNIAGMRGLVNNPKGEIIPRPIISSYREGLSVAEYFIATHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTTKGLEFTIAAPGADGTLVRDANVENSVFARTLAADVVDAKGTVVAEAGQDVGDVLIDRLVEAGVESIKVRSVLTCESAVGVCAKCYGRSLATGKIVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGSASAEDITQGLPRVQELFEARTPKGASPIAESDGRITIDETDRSKKVILTPDNGDEPIAYPVLKRATLLVEDGQHVTVGQPLQVGTLDPKEIMRVMGAREVQKYLVNGVQGVYRSQGVPIHDKHIEVIVRQMLRKVTVVDHGDTTLLPGELVDSRRFIDLNRQSVGEGKRPASGRPELMGITKASLATESWLSAASFQETTRVLTQAAMEGKSDPLVGLKENVIIGKLIPAGTGLSKYRNVTVEATEEAKSERYPNRIFA