ggKbase home page

SCNpilot_cont_300_bf_scaffold_8298_curated_3

Organism: scnpilot_dereplicated_Microbacterium_2

near complete RP 51 / 55 BSCG 50 / 51 MC: 3 ASCG 11 / 38
Location: comp(983..1828)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 278.0
  • Bit_score: 421
  • Evalue 9.10e-115
truA; pseudouridylate synthase; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 72.5
  • Coverage: 280.0
  • Bit_score: 406
  • Evalue 5.20e-111
tRNA pseudouridine synthase A n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NEJ4_MICTS similarity UNIREF
DB: UNIREF100
  • Identity: 72.5
  • Coverage: 280.0
  • Bit_score: 406
  • Evalue 1.70e-110

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium mangrovi → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 846
GTGCGGATCAGGCTCGACATCGCGTACGACGGGACGCATTTCCGCGGCTGGGCGCGCCAGCCGGGTCTTCGCACCGTGCAAGGCGCACTCGAGGACGCCATCGCGCGCATCCTCGGCGGAGAGGTCTCGCTGGTCGTCGCCGGACGGACGGATGCCGGAGTGCACGCGCACGGCCAGGTGGCGCACCTGGACCTCGACGCCGCTCAGGAGGAACGACTGCGTGCCACCACCCGGCGGGAGGAGGCATCCGACCCCGTGGGCCGGCTCGCGCACCGTGTGCGAGGGGCGCTCGGCGCGTACAGCGACCTCGCCGTCCGCCGCGCGACCGTGGCGCCCGAAGGGTTCGACGCGCGCTTCAGCGCGGTCTGGCGGCGCTACGAGTACCGCGTCGCCGACGACGTGAGCGGCTACGATCCGCTCGAGCGCCTGCGGACCACGACCGTGCGTGGCCGGCTCGACGTGGCCCGCATGGATGCCGCCGCGCGCTCGCTGGTTGGCCTCCACGACTTCGCCGCCTACTGCAAGGCGCGCGAGGAGGCGACGACGATCCGTACCCTCCTCGTCTTCCAGTGGCGTCGCGACGCGGAGGGCGTGCTGGTCGCCGACGTCAAGGCCGACGCGTTCTGCCATTCGATGGTGCGTGCCCTCGTCGGCGCGTGCGCCGCGGTCGGCGCCGGCCGCCTCGAGGTCGCGGACGTCGCACGCCTGCGCGACGACGCCCAGCGCACGAGCGGGTTCACCGTCCTGGCCGCGCGCGGACTCACGCTGCGCGAGATCGGCTATCCCGCCGACGACCTCCTCGCTGCCCGCGCCGAGCAGACGCGGGCACGTCGCGATGCGGGATAG
PROTEIN sequence
Length: 282
VRIRLDIAYDGTHFRGWARQPGLRTVQGALEDAIARILGGEVSLVVAGRTDAGVHAHGQVAHLDLDAAQEERLRATTRREEASDPVGRLAHRVRGALGAYSDLAVRRATVAPEGFDARFSAVWRRYEYRVADDVSGYDPLERLRTTTVRGRLDVARMDAAARSLVGLHDFAAYCKAREEATTIRTLLVFQWRRDAEGVLVADVKADAFCHSMVRALVGACAAVGAGRLEVADVARLRDDAQRTSGFTVLAARGLTLREIGYPADDLLAARAEQTRARRDAG*