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SCNpilot_cont_300_bf_scaffold_23503_curated_4

Organism: scnpilot_dereplicated_Microbacterium_2

near complete RP 51 / 55 BSCG 50 / 51 MC: 3 ASCG 11 / 38
Location: 1678..2244

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.4
  • Coverage: 188.0
  • Bit_score: 360
  • Evalue 1.70e-96
def; N-formylmethionyl-tRNA deformylase; K01462 peptide deformylase [EC:3.5.1.88] similarity KEGG
DB: KEGG
  • Identity: 80.9
  • Coverage: 188.0
  • Bit_score: 327
  • Evalue 2.70e-87
polypeptide deformylase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036935EF similarity UNIREF
DB: UNIREF100
  • Identity: 89.4
  • Coverage: 180.0
  • Bit_score: 347
  • Evalue 8.00e-93

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Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 567
GTGGCCGTTCTCCCGATCCGCATCATGGGCGATCCCGTCCTGCACGCCCCCGCCAGTCCCGTCGACGAGATCACGGACGAGATCCGCACGCTGGTCGCGGACATGTTCGAGACCATGGACGCCGCACCGGGAGTCGGCCTCGCCGCCCCGCAGGTCGGGGTGCCCCTGCGCATCTACACGTACTCCTATCCGGACGACGATGGCGCACCCTGGCGCGGCGTGATCATCAACCCCGAGCTCTGGATGCGGCCCCTCGTCCCCGGCGAACCCGATCCCGACGACGAGTCAGAGGGCTGCCTGTCGTTCCCCGGAGAGAGGTTCCCGCTCCGACGCTCGGACGAGGTGCTCGTCACGGGCATCGCGCTCGACGGCTCCCCCGTGCGGATCGAGGTGGACGGATGGAGGGCGCGCATCATGCAGCACGAGTTCGACCACCTCGACGGCATCCTCTATGTCGACAGGCTCGATGACGGGGAGTGGAAGACCGTGCAGAAGATCGCGCGCAAGCGGGGCTGGGGCCGGCCTGGGCAGGCGTGGACGCCCGGCGTCGACGCCGTGGACGCCTAG
PROTEIN sequence
Length: 189
VAVLPIRIMGDPVLHAPASPVDEITDEIRTLVADMFETMDAAPGVGLAAPQVGVPLRIYTYSYPDDDGAPWRGVIINPELWMRPLVPGEPDPDDESEGCLSFPGERFPLRRSDEVLVTGIALDGSPVRIEVDGWRARIMQHEFDHLDGILYVDRLDDGEWKTVQKIARKRGWGRPGQAWTPGVDAVDA*