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SCNpilot_cont_300_bf_scaffold_22066_curated_2

Organism: scnpilot_dereplicated_Microbacterium_2

near complete RP 51 / 55 BSCG 50 / 51 MC: 3 ASCG 11 / 38
Location: comp(1151..2401)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00030F7B12 similarity UNIREF
DB: UNIREF100
  • Identity: 70.9
  • Coverage: 426.0
  • Bit_score: 561
  • Evalue 7.80e-157
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:EYT59549.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.0
  • Coverage: 414.0
  • Bit_score: 510
  • Evalue 2.20e-141
putative RNA polymerase ECF subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 53.9
  • Coverage: 414.0
  • Bit_score: 398
  • Evalue 3.60e-108

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Taxonomy

Microbacterium sp. UCD-TDU → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1251
GTGACTCCGTCGGATGCCGCGCCCCGCGGTCCCGCGACCGGCGGGGGCGCGGCATCCGATCGCCTTCTCGAGCGGACCGTGCGCGAGGAGTCCGCGCGCATCGTCGCGGCGCTCACGCGATCGTTCGGGAGTCTCGACATCGCGGAGGAGGCGGTCGCCGAGGCCGTGGTGGAGGCGCTGCACGAGTGGCGCACGCGGGGCGTACCGCCGAACGCCGGCGCGTGGCTCACCCGGGCGGCTCGCAACAACGCGGTGGACAGACTCCGTCGAGAGCGCCGCTACCGCGACAAGCTCGCCCTGCTGTCCACAGACCCGGCCGAGGCGCCCCTCGCCGACGCGGACATCGACGAGCGGATCCCGCTGCTGTTCGGGTGCTGCCACCCCGCCCTGTCGCCTGAGGCGCAGCTCGCTCTCACCCTCCGGGCGGTCTGCGGCCTGACGACGGCGCAGATCGCGCGCGCGACGCTCACCCCGGAGTCCACCGTGGCGCAGCGCATCGTCCGCGCGAAGCGCAAGATCGGGGCCGCGGGCATCCCGCTGCGGATCCCGGATCCCTCCGAGCGCGTCGCGCGACTCGACCTCGTGCTGGCCGTGGTGTCGGTGATGTACAGCGAGGCCCACCTCACGCCGGAGCGGGATGCGGCGGCCGATCGCGATGTCGCGGAGGACGCGCTGTGGCTGGCCGGCGTCGTCGTCGCCGCCCTGCCTCAGGAGGCCGAGGCCCACGGTCTGCTGGCCCTCCTCCTGTTCCACCGCGCCCGCGAGGGGGCGCGAGCCGTCGACGGCGAGCTCGTCCTGCTGCCGGACCAGGATCGCTCGCGCTGGGACGCCGCGATCACGGCGCGCGCGCACGCGGCACTCGTCCGCGCCGCCCGGCTGCGGCATCCGGGGCGGTGGCAGCTCCACGCCGCCATCGCCGCGTGCCACTCGGATGCCGCCACCTGGGCGGAGACCGATTGGCTGCAACTGCTGACGCTGTACGACATGCTGCTCGCGTACGACGCCTCGCCCGTCGTGCGGCTCAATCGCGCGGTCGCGCTCGCCGCCGTGGAGGGGCCTGCGGCTGCGCTCGCCGAGATCGACGTCCTCGAACCGCGGCTGCACGACTACCGGCTGTGGCACGCCGTGCGGGCGCACGTCCTGCGTGAGCTCGGGCGCGACGTCGAGGCGCTTGCGGCGGATCTGAGCGCGCTCGAGCTCACCGCCAATCTCGCCGAGCGGCGGATCATCGAGTCGCGTCTGCGGCGCTGA
PROTEIN sequence
Length: 417
VTPSDAAPRGPATGGGAASDRLLERTVREESARIVAALTRSFGSLDIAEEAVAEAVVEALHEWRTRGVPPNAGAWLTRAARNNAVDRLRRERRYRDKLALLSTDPAEAPLADADIDERIPLLFGCCHPALSPEAQLALTLRAVCGLTTAQIARATLTPESTVAQRIVRAKRKIGAAGIPLRIPDPSERVARLDLVLAVVSVMYSEAHLTPERDAAADRDVAEDALWLAGVVVAALPQEAEAHGLLALLLFHRAREGARAVDGELVLLPDQDRSRWDAAITARAHAALVRAARLRHPGRWQLHAAIAACHSDAATWAETDWLQLLTLYDMLLAYDASPVVRLNRAVALAAVEGPAAALAEIDVLEPRLHDYRLWHAVRAHVLRELGRDVEALAADLSALELTANLAERRIIESRLRR*