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SCNpilot_cont_1000_bf_scaffold_253_curated_14

Organism: scnpilot_dereplicated_Microbacterium_1

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 14032..15135

Top 3 Functional Annotations

Value Algorithm Source
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacteriu similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 367.0
  • Bit_score: 705
  • Evalue 4.10e-200
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase; K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] similarity KEGG
DB: KEGG
  • Identity: 82.1
  • Coverage: 358.0
  • Bit_score: 575
  • Evalue 1.40e-161
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000373BA84 similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 360.0
  • Bit_score: 587
  • Evalue 1.20e-164

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Taxonomy

Microbacterium ginsengisoli → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1104
GTGAGCGACCTCGCCGCGCCGCGGCGCGTCATCGTGCTCGGGTCATCCGGGTCGATCGGCACGCAGGCGCTGGACGTGATCTCCGCCAACCCCGAACGCTTCGAGGTGGTGGGGCTCGCGACCGGCTCGGCGCGCGAGGTGCTCGCCGAGCAGGCCGCGCGGTTCGGCGTCGCCGACACGGCACTGGGGGCCGAGGCTGCCGAGCAGCTGGTTCGGGATGTCGCGTGCGACGTCGTCGTGAACGGGATCACCGGTTCGGTGGGGCTCGGGCCGACGCTCGCGGCGCTCGAGGCGGGACGTACCCTTGCGCTCGCCAACAAGGAGTCCCTCATCGTCGGCGGCGATCTGGTGAAGCGGGTCGCAACGCCCGGCCAGATCGTGCCGGTGGACTCGGAGCACTCGGCGATCGCGCAGGCGCTGCGATCAGGCAGTTCGGCTGAGGTGCGGCGCCTGGTGGTGACGGCGTCCGGCGGTCCATTCCGCGGTCGTACCCGTGGCCAGCTCGCCGCCGTGACCCCCGCCGAGGCCCTTGCGCATCCGACCTGGAACATGGGACGGGTCGTCACGACCAACTCCGCGACCCTCGTCAACAAGGGTCTCGAGGTCATCGAGGCGCACCTGCTGTTCGACATCGACTACGACCGCATCGATGTGGTCGTGCACCCGCAGTCGATCGTGCACTCCATGGTCGAGTTCGTCGACGGGTCGACGATCGCCCAGGCGTCGCCGCCCGACATGCGGCTGCCGATCTCGCTCGGCCTCGACTGGCCGCACCGGGTCGCCGGGGTGGGTGCGCCGATCGACTGGACTCGTGCCGCCGCGTGGACGTTCGAGCCGCTCGACGAGGAGGCCTTCCCGGCCGTCGCGCTCGCGAAGCGGGTGGGCCGGGCCGGATCGACCTATCCGGCGGTGTTCAACGCGGCGAACGAGCAGGCGGTCGACGCCTTCCACGAGGGACGGCTGTCGTTCCTCGGCATCGTCGACACGGTGCGAGCGATCGTCGACGAGCACGACGCTCCGACCGATCTCACGCGCGAGAGTCTCGCCGAGGCAGAGGCGTGGGCGCGCCGCGCAGCCGATGAGCGGATCGCCGCGGCATCCTGA
PROTEIN sequence
Length: 368
VSDLAAPRRVIVLGSSGSIGTQALDVISANPERFEVVGLATGSAREVLAEQAARFGVADTALGAEAAEQLVRDVACDVVVNGITGSVGLGPTLAALEAGRTLALANKESLIVGGDLVKRVATPGQIVPVDSEHSAIAQALRSGSSAEVRRLVVTASGGPFRGRTRGQLAAVTPAEALAHPTWNMGRVVTTNSATLVNKGLEVIEAHLLFDIDYDRIDVVVHPQSIVHSMVEFVDGSTIAQASPPDMRLPISLGLDWPHRVAGVGAPIDWTRAAAWTFEPLDEEAFPAVALAKRVGRAGSTYPAVFNAANEQAVDAFHEGRLSFLGIVDTVRAIVDEHDAPTDLTRESLAEAEAWARRAADERIAAAS*