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SCNpilot_cont_1000_bf_scaffold_4303_curated_1

Organism: scnpilot_dereplicated_Microbacterium_1

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 1..2739

Top 3 Functional Annotations

Value Algorithm Source
Putative conjugative relaxase n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6W624_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 72.7
  • Coverage: 912.0
  • Bit_score: 1300
  • Evalue 0.0
Conjugal transfer protein {ECO:0000313|EMBL:AHI02833.1}; TaxID=1451189 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium falsenii DSM 44353.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.6
  • Coverage: 912.0
  • Bit_score: 1314
  • Evalue 0.0
conjugative relaxase domain protein, TrwC/TraI family similarity KEGG
DB: KEGG
  • Identity: 72.3
  • Coverage: 905.0
  • Bit_score: 1296
  • Evalue 0.0

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Taxonomy

Corynebacterium falsenii → Corynebacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2739
GAGCCCCGCGATATGGGCCGGGACCGCAACCCGGCCTGGGCCATCGTCGGTGTCCCGGAGGAGCTGGTGGCCGAGTTCTCCACCCGCGCCCGGCATATCGACGCCGAGACCGACCGCCTCATCGAGCATTACGTGAGCGACCACGGGCGGCGGCCGTCACCGGCCACGATCATGAAACTGCGCGCCCAAGCCACCCTGACGACGAGGCCGGAGAAACACGTTCACTCCCTGGCCGAGCTGACCGCCGACTGGCGCGAACGCGCCGGCCGGGTCCTCGGTATGGATGCGACCGGATGGGCGCGCACCATCACCGCGAACGACGCCCCGTTGCTGTTGCGGGCGGACGACATCCCGCTGGACGTGATCGCCGACCTCGGACAGAAGGTGGTCGAGGCCGTCGGGGAGAAGCGGTCCACCTGGCGCCGCTGGAACCTGACCGCTGAGGCCGCCCGGCAGACGATGGACTACCGGTTCGCCAGCACGGTGGACCGCGAAGCTGTGATCGGGTTGGTGGTGGACGCCGCCGAAGCCGCCTCCCTGCGCCTGACACCGCCCGAGCTCACCATGAGTCCGGCGGTGTTCCAGCGCCCGGACGGCACCTCGGTGTTCCGGCCGAAGCACTCGACGGTGTTCTCCTCCGAGGTGTTGTTGGCGGCCGAGGACCGGCTTCTCGAGCGCGCTCGCACCACCACTGGCCCCACCGTGCCATTGGCGACCGTGGAAGGGATCACCGCCAAGCCCGATCGGTCGGGTCGGATGCTCGGTGAGGATCAAGCCGACGCTTTGGTCAAGGTCGCGGTCTCGGGCCGCACCGTGGACGTGCTGGTCGGGCCAGCCGGAGCCGGGAAGACCACCGCCATGAACGCGCTACGCCGGGCATGGGAGACCGAACACGGCACCGGCAGCGTGGTCGGGTTGGCGCCCTCCGCGGTGGCGGCGCAGGTCCTCGCCGACGACCTCGGGATCGAGACTGAGAACACCGCGAAGTGGTGGCAGAACCATCTCATGCACGGTGACACCTTCCAGGCCGGTCAGCTCGTGATCCTGGACGAAGCCTCCCTGGCCGGCACCCTCTCCCTGGACCGCCTCACCGCCCTCGCCGCCGAGGCGGGCGCGAAGGTGCTGCTCGTGGGTGACTACGCCCAACTCCAATCCGTCGACGCAGGCGGCGCCTTCGGACTCCTGGTCAGTGACCGCGCCTCGGATGGAGATGGCGCCCCGGAGCTGGTCGACATCCACCGCTTCAAGAACCAGTGGGAGAAGACCGCCTCCCTCGGTCTGCGGCACGGCCACACCGCGGTCATCGACACCTACCTCGACCACGGCCGAATCATCGACGGCGACACCGAGACCATGATCGACACCGCCTACACCGCGTGGCGGGCCGACATGCTCGCCGGAAAGGCGACCGTGCTGGTCACCGACTCCACCCAGGCCGTCACCGCGTTGAACGTGCGCGCCCGTACCGACCTGATCCTGGACGGCACCGTCCACGGGCCGCAGGAGGTCGAGCTGCACGACGGAACCCAAGCCGCGATCGGGGATACGGTCATCACCCGGCACAACGACCGACGCCTGCGCGCCGGGCGGTCCTGGGTCCGCAACGGCAACCGCTGGACCGTCACCGGCGTCCGCGGCGACGGCTCGGTCACCCTGCGCCGCGCCGGGAAACGGTGGGGTGCCTCAGTGGTGTTGCCGGCGGACTACGTGGCCGAATACCTGGACCTGGGGTACGCGGTCACCTCCTACCGTGCGCAGGGCATCACCACCGATACCGCGCACGTGCTGGTCGACGCCGCGATGACGCGGGAAAACCTGTACGTCGCGCTGACCCGTGGCCGCGAACGGAACATGGCCTACGTCGCGGTCGACAAGCCCGACCCCGCCCACGACACCGCACATCCCGGCGACAATCCCGAGGCGACCGGCAGGTCGGTGCTGTTCGGGGTGTTGCAGCACATCGGCGCCGAACTGTCCGCGCACGAGACCATCACCACCGAACAAGAGCAGTGGTCGAGCATCGCCCAGCTCGCGGCCGAGTACGAGACCATCGCCGCAGCCGCCCAACACGACCGATGGGTCACCCTCATCCGAGCCTCCGGGCTCACCGATGAAGAAGCCGAGGACGCCATCGCCTCCGATGCCTTCGGCGCCTTGGCCGTCGAGCTGCGCCGCGCCGAAGCCAACCGCCACGACATCGCGGCCCTGCTTCCGCGGCTGGTCGCGGCACGAGGGTTCGCCGATGCCGACGACATCGCCGCCGTCCTCCACCACCGACTCGCCACGGCTACGGCCCGGCCCGCCGGGTCTGGTCGCACCCGCAAACCCCCGCGGCTCATCGCCGGCCTGATCCCCAAAGCCACCGGCGCCATGAGCCCCGACATGCGCCAGGCGCTCACCGAACGACGCGACCTCATCGAAGCCAGCGCCGACGCGATCCTCGATTCCGCCTTGGCGGAAGGGCAGCACTGGGCGACCGCGCTCGGCACCCCGCCCGGTGACAGGCGGACGGCGGCAGAGTGGCGACGCTACGCCCGCACCGTGGCCGCCTACCGCGACCGCTACGGCATCAACGATCCCGCGCCCCTCGGCGCACCGGCCGAGAGCACCGCTCAGAAGATCGACGCCGCCCGCGCCCGTACAGCACTCGACCAGGCACAGCGCATCACCGACCCCGAGCGCAACCAGCCGGAGCCCGCCCGTGGCACGACCAGACAGCCGGTCGGTCCCACGCTGTAG
PROTEIN sequence
Length: 913
EPRDMGRDRNPAWAIVGVPEELVAEFSTRARHIDAETDRLIEHYVSDHGRRPSPATIMKLRAQATLTTRPEKHVHSLAELTADWRERAGRVLGMDATGWARTITANDAPLLLRADDIPLDVIADLGQKVVEAVGEKRSTWRRWNLTAEAARQTMDYRFASTVDREAVIGLVVDAAEAASLRLTPPELTMSPAVFQRPDGTSVFRPKHSTVFSSEVLLAAEDRLLERARTTTGPTVPLATVEGITAKPDRSGRMLGEDQADALVKVAVSGRTVDVLVGPAGAGKTTAMNALRRAWETEHGTGSVVGLAPSAVAAQVLADDLGIETENTAKWWQNHLMHGDTFQAGQLVILDEASLAGTLSLDRLTALAAEAGAKVLLVGDYAQLQSVDAGGAFGLLVSDRASDGDGAPELVDIHRFKNQWEKTASLGLRHGHTAVIDTYLDHGRIIDGDTETMIDTAYTAWRADMLAGKATVLVTDSTQAVTALNVRARTDLILDGTVHGPQEVELHDGTQAAIGDTVITRHNDRRLRAGRSWVRNGNRWTVTGVRGDGSVTLRRAGKRWGASVVLPADYVAEYLDLGYAVTSYRAQGITTDTAHVLVDAAMTRENLYVALTRGRERNMAYVAVDKPDPAHDTAHPGDNPEATGRSVLFGVLQHIGAELSAHETITTEQEQWSSIAQLAAEYETIAAAAQHDRWVTLIRASGLTDEEAEDAIASDAFGALAVELRRAEANRHDIAALLPRLVAARGFADADDIAAVLHHRLATATARPAGSGRTRKPPRLIAGLIPKATGAMSPDMRQALTERRDLIEASADAILDSALAEGQHWATALGTPPGDRRTAAEWRRYARTVAAYRDRYGINDPAPLGAPAESTAQKIDAARARTALDQAQRITDPERNQPEPARGTTRQPVGPTL*