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scnpilot_expt_750_p_scaffold_388_curated_5

Organism: scnpilot_dereplicated_Micrococcales_2

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: 4776..5429

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B52918 similarity UNIREF
DB: UNIREF100
  • Identity: 71.1
  • Coverage: 218.0
  • Bit_score: 294
  • Evalue 1.20e-76
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.9
  • Coverage: 215.0
  • Bit_score: 290
  • Evalue 1.40e-75
rplD; ribosomal protein L4; K02926 large subunit ribosomal protein L4 similarity KEGG
DB: KEGG
  • Identity: 65.6
  • Coverage: 215.0
  • Bit_score: 282
  • Evalue 1.50e-73

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Taxonomy

Microbacterium mangrovi → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGTCCGCCATCGACGTCGTCGACGCCAAGGGCAAGAAGGTCGGATCCGTCGACCTCCCCGCCGAGGTGTTCGACGTGCAGACCAACGTGCCGCTCATCCACCAGGTCGTCACCGCGCAGCTCGCGGCGGCGCGCCAGGGCACGCACAAGACGAAGAACCGCGGCGAGGTCTCCGGGACCGGCGTCAAGCCGTTCAAGCAGAAGGGCACCGGCCGCTCCCGTCAGGGCTCGGTCCGCGCGCCCGAGCACCGCGGCGGCGGCACCGTGCACGGCCCGCAGCCGCGCGACTACTCGCAGCGCACCCCGAAGAAGATGATCGCCGCCGCGCTCAGGGGCTCGCTCTCCGACCGCGCCCGCGCCGGCCGGCTGCACGTCGTCGAGGCGCTCAGCGTCGACGGGGTGCCGGGGACCCGGCTCGCGGCCGAGATCCTCGGCTCGCTGACCAGCGGCAAGTCGACGCTCGTCGTCGTCCGCGACCACGCCAGCGCGTGCGCCAAGTCGGTGCGCAACCTGCCCGCGGTGCACGTCATCGAGGCCGGCCAGCTGAACGCCTACGACGTGCTCGTCGCCGACGACATCGTCTTCACCCGTTCCGGCTACGACGCCTTCGTGGCGGCGCAGGCGGGCGCGAAGCCTGAGGAGGTGACCGCGTGA
PROTEIN sequence
Length: 218
MSAIDVVDAKGKKVGSVDLPAEVFDVQTNVPLIHQVVTAQLAAARQGTHKTKNRGEVSGTGVKPFKQKGTGRSRQGSVRAPEHRGGGTVHGPQPRDYSQRTPKKMIAAALRGSLSDRARAGRLHVVEALSVDGVPGTRLAAEILGSLTSGKSTLVVVRDHASACAKSVRNLPAVHVIEAGQLNAYDVLVADDIVFTRSGYDAFVAAQAGAKPEEVTA*