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scnpilot_expt_750_p_scaffold_388_curated_6

Organism: scnpilot_dereplicated_Micrococcales_2

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: 5426..5725

Top 3 Functional Annotations

Value Algorithm Source
rplW; ribosomal protein L23; K02892 large subunit ribosomal protein L23 id=7719966 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 85.0
  • Coverage: 100.0
  • Bit_score: 164
  • Evalue 5.10e-38
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.8
  • Coverage: 99.0
  • Bit_score: 161
  • Evalue 7.90e-37
rplW; 50S ribosomal protein L23 similarity KEGG
DB: KEGG
  • Identity: 81.8
  • Coverage: 99.0
  • Bit_score: 160
  • Evalue 3.90e-37

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Taxonomy

marine actinobacterium PHSC20C1 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 300
GTGAGCCTCACGTACAAGGACCCGCGCGACATCATCATCGCCCCGGTCGTCTCCGAGAAGAGCTACGCGCTCATCGACGAGGGCAAGTACTCGTTCATCGTCGCGACCGACGCGAACAAGACCGAGATCAAGCTCGCCATCGAGAAGATCTTCGGCGTCCGGGTCGAGGCCGTGAACACGCTGAACCGGCAAGGCAAGACCCGCCGCACGCGTGCCGGCATCGGCAAGCGCAAGGACACCAAGCGCGCGATCGTCACGCTCAAGTCCGGCTCGATCGACATCTTCACGGCTGTCGGCTGA
PROTEIN sequence
Length: 100
VSLTYKDPRDIIIAPVVSEKSYALIDEGKYSFIVATDANKTEIKLAIEKIFGVRVEAVNTLNRQGKTRRTRAGIGKRKDTKRAIVTLKSGSIDIFTAVG*