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SCNpilot_cont_300_bf_scaffold_1064_curated_28

Organism: scnpilot_dereplicated_Nitrobacter_1

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 11 / 38
Location: comp(26902..28137)

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase RluD; K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] similarity KEGG
DB: KEGG
  • Identity: 90.8
  • Coverage: 411.0
  • Bit_score: 746
  • Evalue 4.10e-213
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 411.0
  • Bit_score: 746
  • Evalue 1.80e-212
Pseudouridine synthase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QN01_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 411.0
  • Bit_score: 746
  • Evalue 1.30e-212

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1236
ATGAGCCGCCGCATCAAACGACCTCTCGCGAAATCCCGCGGTTCGGGTAGCGAGCGTCCCAAAGACGCTCTGTCCAAAGGTATTCGTTCCAAACGGACACGCCCGGAAGGGCGTGGCGCGGCGGAGCGTTTCGGAGGCGAGCGAGGGCAGGGCGTTCGGCCTGGCAGGCCGCCGCGCGCAGCCACGTCTCGTGATACTTTGCCCTTCATCGAACCGCCCGCCAAACCCGAACCAGCGCCGTTGCCGACGAAAGTGCAGACGGTCGCCGTGACGGCCGACGAAGCCAACATGCGCGTCGATCGTTTTCTCGAAGCGCGATTTCCCAGCCTGTCGTTTTCCCACATTCAGCGCATCGTCCGCAAAGGCGAGCTGCGTGTGAACGGCAAGCGCGCCGACAGCAAGGACCGGCTCGATGAAGGCGACAAGGTTCGCATTCCGCCGCTCAAGCTCGACACGCCGAAGGCTGCGACACACCTGTCCGAGGCCGAGACCAGGATACACGACGAATTGCGGAAGATGGTGCTGTTCGAGGACGCCGACGTCATGGTGCTGAACAAGCCGGCCGGGCTTGCGGTGCAGGGCGGTTCCGGCCTGTCGCGGCACATCGACGGGATGCTCGAAGTGATGCGCGATGCAAAAGGCCAGCGTCCGCGCCTTGTGCATCGGCTCGATCGCGAGACCGCCGGATGCCTGCTGGTGGCCAAGACGCGCTTTGCGGCAACGGCGCTGACCGGGGCGTTCCGCCACCGCTCGGCCCGCAAGATTTACTGGGCGCTGGTCGCGGGCGTGCCGAAGCCGAAGCAGGGCCGGATCTCGACCTATCTCGCCAAGGAAGAAAACGAGGAAGACTCGATCATGCGGATCGCCGCGCATGGCGACGAGGGAGCAAGCCACGCGGTGACCTACTACGCGGTGGTGGAAACCTCGGCGCAGAAGCTCGCCTGGGTATCACTGAAACCGGTGACGGGCCGGACCCATCAACTCCGCGCGCACATGGCGCACATCAATCATGCGATCGTCGGCGACCCCAAGTATTTCAACAAGGAGAACTGGCAATTGCCGGGCGGTCTTCAGAAGCGGCTTCACCTTCTGGCGCGCCGCATCGTGATCCCGCATCCGCGCGGCGGCGTCATCGATGTGAGCGCGCCGCTGCCGCCGCACATGCTGCAATCCTGGAACCTGCTCGGGCTCGAAGCCGACCGGTTCGACCCGATCGAAAACGCGCCGGAGGAGTAG
PROTEIN sequence
Length: 412
MSRRIKRPLAKSRGSGSERPKDALSKGIRSKRTRPEGRGAAERFGGERGQGVRPGRPPRAATSRDTLPFIEPPAKPEPAPLPTKVQTVAVTADEANMRVDRFLEARFPSLSFSHIQRIVRKGELRVNGKRADSKDRLDEGDKVRIPPLKLDTPKAATHLSEAETRIHDELRKMVLFEDADVMVLNKPAGLAVQGGSGLSRHIDGMLEVMRDAKGQRPRLVHRLDRETAGCLLVAKTRFAATALTGAFRHRSARKIYWALVAGVPKPKQGRISTYLAKEENEEDSIMRIAAHGDEGASHAVTYYAVVETSAQKLAWVSLKPVTGRTHQLRAHMAHINHAIVGDPKYFNKENWQLPGGLQKRLHLLARRIVIPHPRGGVIDVSAPLPPHMLQSWNLLGLEADRFDPIENAPEE*