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SCNpilot_cont_300_bf_scaffold_1261_curated_2

Organism: scnpilot_dereplicated_Nitrobacter_1

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 11 / 38
Location: comp(1078..2025)

Top 3 Functional Annotations

Value Algorithm Source
TRAP transporter solute receptor, TAXI family n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IRZ2_RHOP2 similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 315.0
  • Bit_score: 525
  • Evalue 3.60e-146
TRAP transporter solute receptor TAXI family protein; K07080 similarity KEGG
DB: KEGG
  • Identity: 83.8
  • Coverage: 315.0
  • Bit_score: 525
  • Evalue 1.10e-146
TRAP transporter solute receptor, TAXI family {ECO:0000313|EMBL:ABD09018.1}; Flags: Precursor;; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.8
  • Coverage: 315.0
  • Bit_score: 525
  • Evalue 5.00e-146

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 948
ATGAGTTCGAAATTCATCGTTGCCGTTGCCTTGTCTGTCGCCTTCCTTTCGGCCCCAGCCGCCCACGCGCAGCAGTTCATCAATGTGCTGACCGGGGGAACCTCCGGCGTTTACTATCCGCTCGGCGTCGCCATCGGCAAAATATACAGCGACAAGATCCCGAACGTGAAAACCCAGGTCCAGGCGACCAAGGCCTCGGTCGAGAATCTCAATCTGCTGGAGCAGGGGCGTGGCGAGATCGCCTTCACGCTCGGCGACTCGCTGAAGGCGGCGTGGGAAGGCGATGCCGAGGCCGGTTTCAAGACCAAGCTGACCAAGCTGCGGACCATCGGCGCGATCTATCCGAACTACATCCAGATCGTTGCGACTGCTGACAGCGGCATCAAGACGCTGGCCGATCTCAAGGGCAAGACTCTCTCGGTCGGCGCGCCGAAATCAGGAACTGAGCTGAACTCGCGGGCGATCCTGAAAGCGGCCGGCATGGATTACAACGATCTCGGCAAGGTGGAGTATCTGCCGTTCGCCGAGTCCGTGGACCTGATGAAGAACAGGCAGCTCACCGCGACGCTGCAATCGGCCGGTCTTGGCGTCGCTTCGCTGAAGGATCTCAGTAATTCGAACGACATCGTCGTGGTCTCGGTGCCGAAGGAGGTCGTCGACAAGATCGGGCCGCCATTTGTCGCGGCGATCATTCCGGCCAACACCTACAAGGGGCAGGACAAGGACGTCCCCACCGCGGCCGTCGTCAATTACCTCGTCACCAGTTCGGCGGTGTCCGATGATCTCGCCTACCAGATGACGAAGCTGGTTTACGAATCGCTTCCCGACCTGATTTCAGCGCACTCGGCCGCGCGCGGCATCAAGCTGGAAAACGCCGCGATGAATAGCCCGGTTCCGCTGCATCCCGGCGCGATCCGCTACTTCAAGGAAAAAGGACTCATCAAGTAG
PROTEIN sequence
Length: 316
MSSKFIVAVALSVAFLSAPAAHAQQFINVLTGGTSGVYYPLGVAIGKIYSDKIPNVKTQVQATKASVENLNLLEQGRGEIAFTLGDSLKAAWEGDAEAGFKTKLTKLRTIGAIYPNYIQIVATADSGIKTLADLKGKTLSVGAPKSGTELNSRAILKAAGMDYNDLGKVEYLPFAESVDLMKNRQLTATLQSAGLGVASLKDLSNSNDIVVVSVPKEVVDKIGPPFVAAIIPANTYKGQDKDVPTAAVVNYLVTSSAVSDDLAYQMTKLVYESLPDLISAHSAARGIKLENAAMNSPVPLHPGAIRYFKEKGLIK*