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SCNpilot_cont_300_bf_scaffold_23430_curated_2

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: 131..463

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TrbC n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FDE62A similarity UNIREF
DB: UNIREF100
  • Identity: 85.5
  • Coverage: 110.0
  • Bit_score: 183
  • Evalue 1.20e-43
Conjugal transfer protein TrbC {ECO:0000313|EMBL:ETR77827.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.6
  • Coverage: 110.0
  • Bit_score: 180
  • Evalue 1.40e-42
conjugal transfer protein TrbC; K03197 type IV secretion system protein VirB2 similarity KEGG
DB: KEGG
  • Identity: 87.1
  • Coverage: 101.0
  • Bit_score: 171
  • Evalue 1.90e-40

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Taxonomy

Afipia sp. P52-10 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 333
GTGATCCTCAAGCTCCAGAACTTTCGTCGTCATCTTGCCTCCGCAACCACGGCCGCTGTCGTCAGCCTCGCGCTCGCCCCGGGCGCACATGCCTCTGGCTCCTCAATGCCGTGGGAGCAGCCGCTTGAACAAATCCTTCAGTCGATCGAAGGACCGGTCGCGAAGATCATCGCGGTGATCATCATCATCGTTACAGGCTTGACCCTCGCGTTCGGCGACACGAGTGGTGGCTTTCGGAGACTCGTTCAGATCGTCTTCGGCCTCTCGATCGCTTTCGCGGCCAGTTCGTTCTTTCTCAGCTTCTTCAGCTTCGGCGGCGGAGTGCTCGTCTGA
PROTEIN sequence
Length: 111
VILKLQNFRRHLASATTAAVVSLALAPGAHASGSSMPWEQPLEQILQSIEGPVAKIIAVIIIIVTGLTLAFGDTSGGFRRLVQIVFGLSIAFAASSFFLSFFSFGGGVLV*