ggKbase home page

SCNpilot_cont_300_bf_scaffold_19747_curated_3

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: comp(4391..5008)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CE1EE5 related cluster n=1 Tax=unknown RepID=UPI0003CE1EE5 similarity UNIREF
DB: UNIREF100
  • Identity: 76.1
  • Coverage: 205.0
  • Bit_score: 305
  • Evalue 3.80e-80
RNA helicase {ECO:0000313|EMBL:ESY27445.1}; TaxID=1287273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC391B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 205.0
  • Bit_score: 305
  • Evalue 5.30e-80
superfamily II DNA/RNA helicase, SNF2 family protein similarity KEGG
DB: KEGG
  • Identity: 72.1
  • Coverage: 204.0
  • Bit_score: 294
  • Evalue 3.60e-77

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. LNJC391B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
GAGCAACTCAAGGAGCAGGAGCGCGCCGGCAAGGCCAATGCGCGGCTGAACTCCGGCGAGGCTCGCAAGCGGGCGGACGAGCTTCAGGCCCGCCTGCAAAGGCGCATGCAGGAGATCAAGCGTGAGCGTCAGTTGGCGCCGCTGCCGCCCGTGGTGCTTGGTGGCCTCCTAGTCGTGCCCATCGGATTGATACGCGCAATGGGCGGTCAGTCACACGCAACCGCCCAGACGGTGGTCGATACCCAGGCCGCGGCGGCTCGGGCGCGGGAGATCGTAATGGAGGTCGAGCGCGGGCTCGGTTTCGTCCCGACTGATCGGGAGTTCGAGAAGCTCGGCTATGACATCGAAAGCGCCATCCCAGGCACTGGGCGCCTGCGCTTCATCGAAGTGAAGGGTCGTGTCGCGAGCGCGGACACCGTCACCGTGACGAAGAACGAGATCCTCTACTCGCTCAATAAACCTGACGACTTCATCCTGGCGATGGTTGCTTTCGGCGCAGACGGATCGCACGAGGTCCGCTACCTGCGGAGGCCATTCGGCCAAGAGCCGGATTTCGGAGTGACGAGTGTCAACTATGAATTCTCAGAACTGCTAAGGCGAGCGGAGGTGCCTCGATGA
PROTEIN sequence
Length: 206
EQLKEQERAGKANARLNSGEARKRADELQARLQRRMQEIKRERQLAPLPPVVLGGLLVVPIGLIRAMGGQSHATAQTVVDTQAAAARAREIVMEVERGLGFVPTDREFEKLGYDIESAIPGTGRLRFIEVKGRVASADTVTVTKNEILYSLNKPDDFILAMVAFGADGSHEVRYLRRPFGQEPDFGVTSVNYEFSELLRRAEVPR*