ggKbase home page

SCNpilot_cont_300_bf_scaffold_9804_curated_3

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: comp(1577..2245)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00037D7E22 similarity UNIREF
DB: UNIREF100
  • Identity: 64.7
  • Coverage: 221.0
  • Bit_score: 294
  • Evalue 9.50e-77
LysR family transcriptional regulator {ECO:0000313|EMBL:ETR77817.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.9
  • Coverage: 220.0
  • Bit_score: 293
  • Evalue 2.30e-76
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 63.1
  • Coverage: 222.0
  • Bit_score: 283
  • Evalue 5.30e-74

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia sp. P52-10 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
ATGGCTGCCGCCGCGACTGCTGCTGGACGGGGCGAGGCGGGGCGACTGGTCGTGGGATTCTATACGTCGCTATCCACTGGCAACCTGCGCCTGGCACTTCAGGACTTCAAACAAAGCAAGAAGGAGGTCGAGATCGTTACGGTCGAGGGCACGCGCAACAGGCTCTTCAGCGGCCTGAGCAACGGTGCAATCGACATTGTGATCGTCACCGGCGACTCCGGGAATAGCCGCTTCGACTCACTGCCGCTTTGGAGCGAGCGCGTAATTGTCGCGCTACCCGAGTCGCATCCTCTCGCCGAAAACGAGATCGTCTATTGGACCGACCTCCGAGGAGAGACGTTCCTCCTCAGCCAGCGCGATCCGGGCCCGGAGATTCAGGATATCCTCGTGGCGAAGCTGGCTGCACCAGGAGATCGGCCACGCGTCGTCAGGCACGATGCCAGCGGCGAGAATATCAAAAGCCTCGTCGGCGCCGGCTTTGGCGTGAGTCTGATGTGCGAAGCGTCAATCGGCGGCAAATTCAACGGCGTCGTCTACAGAGAGGCGCGCGACGGCAATGGGCCGACCGGCATCAGCTATGCCGCTCATTGGGACCGCGATAACGGAAACCCCGCACTCGGCGGCTTTGTTCGTTTGCTAAGAGAGCGCTTCGCGCCGCTCAGCGCCTAG
PROTEIN sequence
Length: 223
MAAAATAAGRGEAGRLVVGFYTSLSTGNLRLALQDFKQSKKEVEIVTVEGTRNRLFSGLSNGAIDIVIVTGDSGNSRFDSLPLWSERVIVALPESHPLAENEIVYWTDLRGETFLLSQRDPGPEIQDILVAKLAAPGDRPRVVRHDASGENIKSLVGAGFGVSLMCEASIGGKFNGVVYREARDGNGPTGISYAAHWDRDNGNPALGGFVRLLRERFAPLSA*