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SCNpilot_expt_300_bf_scaffold_256_curated_10

Organism: scnpilot_dereplicated_Nitrosospira_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(8992..10188)

Top 3 Functional Annotations

Value Algorithm Source
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.7
  • Coverage: 396.0
  • Bit_score: 735
  • Evalue 3.10e-209
tryptophan synthase subunit beta (EC:4.2.1.20); K01696 tryptophan synthase beta chain [EC:4.2.1.20] similarity KEGG
DB: KEGG
  • Identity: 87.6
  • Coverage: 396.0
  • Bit_score: 711
  • Evalue 1.10e-202
Tryptophan synthase beta chain n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKR6_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 90.7
  • Coverage: 396.0
  • Bit_score: 735
  • Evalue 2.20e-209

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1197
GTGAGAGTTTATGATCTGCCCGACAGATACGGCCATTTCGGTCCGTATGGGGGAATTTTTGTCGCCGAGACGCTGATTGCTGCGCTGGATGAGTTGCGCGCGCAATATGAGCTTTCCCGGAACGATGCAGAATTCCAGGCCGAACTTGCCCATGAGCTGAAGCATTACGTTGGCCGCCCTACGCCCATCTATCATGCAAGCAGGTGGTCGGCCCACCTGGGAGGCGCGCAGATTCTGCTCAAGCGGGAAGACCTGAATCATACGGGAGCCCACAAGATCAACAATGCGGTCGGGCAGGCGCTTCTCGCGCGGCGCATGGGCAAGTCGCGCGTCATTGCCGAAACAGGTGCGGGCCAGCATGGCGTGGCGAGCGCCACGGTGGCTGCGCGCTATGGAATGAAGTGCGTGGTTTACATGGGATCGGTGGATGTTGCCCGCCAGTCCGCCAATGTTTACCGGATGAAATTGCTCGGTGCCACGGTGGTGCCGGTCGAATCCGGTTCCCGCACTCTGAAAGATGCGCTGAATGAGGCGATGCGCGACTGGGTGACTAATATCGAGGATACTTTTTATATCATTGGCACCGTGGCGGGACCTCATCCTTATCCCATGATGGTGCGTGATTTCCAGGCGATCATCGGACGCGAGGCGATGCTGCAGATGCAGGAGGAATATGGGCGGCAACCCGATGCGCTAATTGCGTGCGTGGGCGGGGGATCCAATGCCATCGGCCTGTTTTACCCTTATCTGGACGGTGATATCCGGATGATAGGCGTCGAGGCGGCGGGACTCGGGATCGAAAGCGGCCAGCACGCCGCGACGCTGACACGAGGAAGGCCCGGTGTACTGCATGGGAACCGCACTTATCTGATCCAGGACGACAATGGGCAGATCGTCGAGACGCATTCCATTTCTGCCGGCCTCGATTATCCGGGCGTCGGCCCCGAGCATGCCTGGCTCAAGGACAGCAGGCGCGCGGAATACGTCGGGATAACCGATAGCGAAGCGCTGGCAGCATTCCATTCCCTTTGTCATTATGAAGGCATCATTCCTGCCCTCGAATCCAGCCATGCGTTGGCTTATGCCGCCCAGCTTGCGCCAACGCTGGGCCGGGACCAGCTCTTGCTGGTGAACCTGTCGGGAAGGGGTGACAAGGATATGGGCACGGTGGCGCAAGCCTCTCAAATCATGCTCTGA
PROTEIN sequence
Length: 399
VRVYDLPDRYGHFGPYGGIFVAETLIAALDELRAQYELSRNDAEFQAELAHELKHYVGRPTPIYHASRWSAHLGGAQILLKREDLNHTGAHKINNAVGQALLARRMGKSRVIAETGAGQHGVASATVAARYGMKCVVYMGSVDVARQSANVYRMKLLGATVVPVESGSRTLKDALNEAMRDWVTNIEDTFYIIGTVAGPHPYPMMVRDFQAIIGREAMLQMQEEYGRQPDALIACVGGGSNAIGLFYPYLDGDIRMIGVEAAGLGIESGQHAATLTRGRPGVLHGNRTYLIQDDNGQIVETHSISAGLDYPGVGPEHAWLKDSRRAEYVGITDSEALAAFHSLCHYEGIIPALESSHALAYAAQLAPTLGRDQLLLVNLSGRGDKDMGTVAQASQIML*