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SCNpilot_expt_300_bf_scaffold_390_curated_16

Organism: scnpilot_dereplicated_Nitrosospira_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 18307..19512

Top 3 Functional Annotations

Value Algorithm Source
RND transporter MFP subunit n=1 Tax=Xanthomonas sacchari RepID=UPI000262B445 similarity UNIREF
DB: UNIREF100
  • Identity: 58.8
  • Coverage: 388.0
  • Bit_score: 444
  • Evalue 1.30e-121
RND transporter MFP subunit {ECO:0000313|EMBL:AJP48495.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.4
  • Coverage: 399.0
  • Bit_score: 446
  • Evalue 4.90e-122
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 55.8
  • Coverage: 389.0
  • Bit_score: 433
  • Evalue 9.70e-119

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Taxonomy

Rhodocyclaceae bacterium PG1-Ca6 → Rhodocyclales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1206
ATGCCACCTGATTCGCCCGCACCCCCGGCCTCTGCCCGCAAACTTCGCCTTGCCGGCATGGCTGCCATGCTCGGCGTCCTGATTATCGTCGGCAGTGGCCTGGCCATGCGAGCGTTCGATGACAAGCGTTTGCGCGATTGGACCGACGAACAGATTATCCCGACTGTTACGGTTCTTGAACCGGTCTCCAGCGGGGGGACGGTGCGATTCGATCTGCCTGGCCGTCTGCAGGCCTATTCGCGCGCGCTGCTCTATGCGCGCGTCGACGGGTATCTGAAAAGCTGGAAAACCGATATTGGCGCACAGGTCAAGGCTGGAGAGTTGCTCGCCGAAATCGAGACACCCGATCTTGATCAGCAGTTATTGCAGGCAAAAGCCGACCTGGCCAGTACACAGGCGACCGCTGCGCTTGCCAGAACGACTGCTGAACGCTGGGAGCAGCTTGTGGATTCGGGGTATGCTTCAAAACAGGCTGCCGCTGAAAAAACAGGCGACTTCAAGACCAAGGAGGCTCTGGTTAAATCGGCTCAGGCGAATGTCGAGCGTCTGGTGGCATTGAAGAAGTTTACCCGCATCGTTGCTCCCTTTGACGGTATCGTCACTGCCCGCCTGACTGACATCGGGGTACTGGTCAATGCGGGCAGCGGCGTGGGCCAGCAGCTCTTCGAAATATCGAATACCCGGACATTGCGGGTATATGTCAGCGTACCGCAGGTTTACGTACCCCGTATTCCGCCTGGCAGCCCGGTTGCCATCACCGTACCGGAACGGCCGGGCAAGGCCTACTCCGCGACAGTCGCGGCATCGGCGCAGGCGGTTGACAGTACTGCGGGAACGACGCTCATGCAGATTCACGTCGACAATGCCGATGGCGAGTTGCTGCCCGGGGCGTTCGCAAATATCAACTTCCAGTTACCCGGAGACGAGACAGTGATGAGCGTGCCTGCGAGCGCGCTGATGTTCGACAAGGCGGGATTGCGTGTTGCGACGGTGGATGCGAACAACAGGGTTGTGCTAAAAACGGTGACTATCATGCGCGACTTGGGCAAGACTGTCGAGCTTGCCTCGGGCCTGGTTCCTGGCGATCGCGTTATCGAAAGCCCCCCGGATGGCATCGCGGATGGCGATGGCGTGCGCATCAGCCACGCCGCGGGCAAGCCAGACAGAACCAATGGCGCGCCCAGCGGCGGCAAGGGCTTTTACTAG
PROTEIN sequence
Length: 402
MPPDSPAPPASARKLRLAGMAAMLGVLIIVGSGLAMRAFDDKRLRDWTDEQIIPTVTVLEPVSSGGTVRFDLPGRLQAYSRALLYARVDGYLKSWKTDIGAQVKAGELLAEIETPDLDQQLLQAKADLASTQATAALARTTAERWEQLVDSGYASKQAAAEKTGDFKTKEALVKSAQANVERLVALKKFTRIVAPFDGIVTARLTDIGVLVNAGSGVGQQLFEISNTRTLRVYVSVPQVYVPRIPPGSPVAITVPERPGKAYSATVAASAQAVDSTAGTTLMQIHVDNADGELLPGAFANINFQLPGDETVMSVPASALMFDKAGLRVATVDANNRVVLKTVTIMRDLGKTVELASGLVPGDRVIESPPDGIADGDGVRISHAAGKPDRTNGAPSGGKGFY*