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SCNpilot_expt_300_bf_scaffold_564_curated_6

Organism: scnpilot_dereplicated_Nitrosospira_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 3087..3374

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S19 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DXF2_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 95.0
  • Bit_score: 185
  • Evalue 3.50e-44
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531, ECO:0000313|EMBL:KIO47952.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.6
  • Coverage: 95.0
  • Bit_score: 185
  • Evalue 2.90e-44
rpsS; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 similarity KEGG
DB: KEGG
  • Identity: 87.2
  • Coverage: 94.0
  • Bit_score: 175
  • Evalue 6.70e-42

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 288
ATGGCACGTTCCGTTAAAAAAGGACCTTTTGTCGATCTGCATCTGATCTCGAAGGTGGAGGTTGCGCGCGCAACCAACGACAAGCGGCCGATCAAGACATGGTCCCGCCGTTCGACAATTCTTCCCGATTTTATCGGCCTGACCATTGCCGTGCACAATGGCAAGCAGCATATCCCCATATATGTCACGGAGAACATGGTAGGGCACAAGCTGGGGGAATTTTCGCATACCCGGGTTTTCAAGGGCCATTCGGGCGACAAGAAGGCGGGCGCGGGATCAAAGAAATAG
PROTEIN sequence
Length: 96
MARSVKKGPFVDLHLISKVEVARATNDKRPIKTWSRRSTILPDFIGLTIAVHNGKQHIPIYVTENMVGHKLGEFSHTRVFKGHSGDKKAGAGSKK*