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SCNpilot_expt_300_bf_scaffold_564_curated_13

Organism: scnpilot_dereplicated_Nitrosospira_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 6112..6429

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L24 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLU4_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 89.4
  • Coverage: 104.0
  • Bit_score: 194
  • Evalue 6.30e-47
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326, ECO:0000313|EMBL:KIO47959.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.5
  • Coverage: 105.0
  • Bit_score: 196
  • Evalue 1.80e-47
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 similarity KEGG
DB: KEGG
  • Identity: 70.5
  • Coverage: 105.0
  • Bit_score: 161
  • Evalue 1.40e-37

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 318
ATGCGGAAAATAAAAAAGGGTGATGATGTTGTTGTCATCAGCGGCAGGGATAAAGGCAAGCGGGGCACCGTATTGCGTGTGGTAAGCGCTGACCTCGTAGTTGTCGAGGGGGCCAATAAGGTCAAGAAGCACCAGCGGCCGAACCCGAATAAAGGTACCACCGGCGGAATTGTCGAAATGGAGAAACCTGTCCAGATTTCCAACGTGGCAATATTCAATCCCGCTACGCAAAAGCCGGATCGCGTGGGTATCAGAATTCTTGAAGATAAACGCAAAGTCCGCTATTTCAAATCGAACGGCGAGTTGCTTGACGCGTAG
PROTEIN sequence
Length: 106
MRKIKKGDDVVVISGRDKGKRGTVLRVVSADLVVVEGANKVKKHQRPNPNKGTTGGIVEMEKPVQISNVAIFNPATQKPDRVGIRILEDKRKVRYFKSNGELLDA*