ggKbase home page

SCNpilot_expt_300_bf_scaffold_564_curated_17

Organism: scnpilot_dereplicated_Nitrosospira_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 7853..8386

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKD6_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 84.5
  • Coverage: 174.0
  • Bit_score: 297
  • Evalue 1.20e-77
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.5
  • Coverage: 174.0
  • Bit_score: 297
  • Evalue 1.60e-77
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 81.4
  • Coverage: 177.0
  • Bit_score: 291
  • Evalue 1.50e-76

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGTCTCGAGTGGGAAAAAATCCTATTCCGGTTCCGGCGAATGTGGAGGTAACCTTGTCGGATTCCGAAGTGGCGGTAAAGGGACCGCTGGGTACATTGCGCCGCGATATCGGATCCGATATCGCTGTCGAGCGCGAAGGGGATAGCTTGCTGATAAAAGTCTCCAACGATACCAAGCACGCCAACGCCATGTCCGGAACGATGCGCGCCTTGCTGGCGAATATGGTGAAAGGCGTAACCAGCGGCTTCGAGAAGAAACTGACATTGGTGGGAGTGGGATATCGCGCTCAAGCGGCTGGTGACGTCCTGAATTTGACGCTGGGATTCTCTCATCCGGTCGCGCATAAAATGCCCGAGGGAATAAAGGTCGAAACGCCGACCCAGACAGAAGTCATCATAAAAGGCATAGATAAGCAGCAGGTTGGCCAGGTTGCCGCCGAGGTGCGTGCCTACCGTATCCCGGAACCGTACAAGGGCAAGGGTGTACGATATGCCGACGAGGTAATCGTCATGAAAGAAACCAAGAAGAAATAA
PROTEIN sequence
Length: 178
MSRVGKNPIPVPANVEVTLSDSEVAVKGPLGTLRRDIGSDIAVEREGDSLLIKVSNDTKHANAMSGTMRALLANMVKGVTSGFEKKLTLVGVGYRAQAAGDVLNLTLGFSHPVAHKMPEGIKVETPTQTEVIIKGIDKQQVGQVAAEVRAYRIPEPYKGKGVRYADEVIVMKETKKK*