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SCNpilot_expt_300_bf_scaffold_564_curated_24

Organism: scnpilot_dereplicated_Nitrosospira_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 11692..12072

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S13 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLQ8_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 89.7
  • Coverage: 126.0
  • Bit_score: 230
  • Evalue 7.30e-58
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315, ECO:0000313|EMBL:KIO47970.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 126.0
  • Bit_score: 232
  • Evalue 3.50e-58
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 similarity KEGG
DB: KEGG
  • Identity: 90.3
  • Coverage: 124.0
  • Bit_score: 226
  • Evalue 4.30e-57

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 381
ATGGCCCGTATCGCTGGAGTAAACATTCCCAATCATCAGCATGCCGAGATCGCGCTGACTTCGATATATGGCATCGGCCGCACCCGAGCCCGTGAGATTTGCGTGGCTACGGGCATAGAAACCACGACCAAGATCAAAGACGTGACCGATGCCCAGATGGACAAATTACGGGACCACGTGGCTAAGTTCGTCGTGGAAGGCGATTTGCGAAGAGAAGTGTCGATGAACATAAAACGCCTGATGGATCTCGGTTGCTATCGTGGCCTGCGCCATCGTCGCGGCTTGCCCGTGCGAGGGCAGCGTACGCGTACCAATGCCAGGACGCGCAAGGGACCCCGCAAGGCGGTTCGTTCTTCCAGCGCAAAGGCGGCAACACGCTAA
PROTEIN sequence
Length: 127
MARIAGVNIPNHQHAEIALTSIYGIGRTRAREICVATGIETTTKIKDVTDAQMDKLRDHVAKFVVEGDLRREVSMNIKRLMDLGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKAVRSSSAKAATR*