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SCNpilot_expt_300_bf_scaffold_145_curated_29

Organism: scnpilot_dereplicated_Nitrosospira_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(37731..38699)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoS n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBR5_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 80.4
  • Coverage: 312.0
  • Bit_score: 502
  • Evalue 2.50e-139
RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 312.0
  • Bit_score: 502
  • Evalue 8.00e-140
RNA polymerase sigma factor RpoS {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma S {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma-38 {ECO:0000256|HAMAP-Rule:MF_00959}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.4
  • Coverage: 312.0
  • Bit_score: 502
  • Evalue 3.60e-139

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Taxonomy

Nitrosospira multiformis → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 969
ATGAGCTATTCAGACGATAACGGTGATGACGAGGATGAGGAAGCGCTGGATTCCGTGGATTCGCCCGAAACGGACGATGAGTCGGCGGCCATTTCTGAAAGCGGCGTCACGGTTGCTGGCAGTGACTCCAGTGATTTTCTTCTGACTGACGTAACGCAAATATATTTCAACGAAATCGGCCACAACGCATTGCTGACTCCGAAAGAGGAAGTGGAGCTCACGCGCCTCGTCAGGCAGAATGACTTCAATGCCCGGCAAAGAATGATCGAGTGCAATTTGCGGTTGGTGGTGAATATCGCCAAGCACTATGCCAACCACGGCGTCGCGCTGCTGGATCTCATCGAGGAAGGCAACATGGGGATGATGCACGCGCTGGACAAATTCGATCCCGAGCGCGGTTTTCGTTTCTCCACTTACGCCACCTGGTGGATACGGCAGAATATCGAACGCTGCATCATGAATCAGTCGCGCACGATCCGCCTGCCTGTTCATGTCATCAAGGATCTGAATGTTGTCCTGCAGGCGGCCCGTCACCTTGAAGCTCATACTGGCAAGGAACCTAAACCGGAAGATGTGGCCCGTCTGCTGGGCCGCCCCGTCGAGCATGTGGAGCGCATGCTATCCCTGAACATGAGCATGATGTCGCTGGACGCTCCGCTCGATGTCGATCCTCTCCTGTCCGTCGGCGATGTCATGGCCGACGAAAAATCAGCCGGCCCCGATGCGATGCTGGAGCAATCCGAGATCAAGGACCGGGTAAAGGAATGGCTCAGCCGTTTGAACGACAAGCAGCGCCATATCATCGAGCATCGCTATGGGCTGAATGCCTGTGAAATTCAAACCCTGGAGCAGCTGGCGTCAAGCCTTGGGCTTACTCGCGAACGGGTGCGCCAGATTCAGCTGGAAGCACTGGAAACGCTGCGCGGCATATTGAAATGCGATGGAGTTTCGAAGGAAGGAATATTTTAG
PROTEIN sequence
Length: 323
MSYSDDNGDDEDEEALDSVDSPETDDESAAISESGVTVAGSDSSDFLLTDVTQIYFNEIGHNALLTPKEEVELTRLVRQNDFNARQRMIECNLRLVVNIAKHYANHGVALLDLIEEGNMGMMHALDKFDPERGFRFSTYATWWIRQNIERCIMNQSRTIRLPVHVIKDLNVVLQAARHLEAHTGKEPKPEDVARLLGRPVEHVERMLSLNMSMMSLDAPLDVDPLLSVGDVMADEKSAGPDAMLEQSEIKDRVKEWLSRLNDKQRHIIEHRYGLNACEIQTLEQLASSLGLTRERVRQIQLEALETLRGILKCDGVSKEGIF*