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SCNpilot_cont_300_bf_scaffold_135_curated_2

Organism: scnpilot_dereplicated_Novosphingobium_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 290..892

Top 3 Functional Annotations

Value Algorithm Source
TetR-family transcriptional regulator n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z7R4_SPHJU similarity UNIREF
DB: UNIREF100
  • Identity: 62.8
  • Coverage: 196.0
  • Bit_score: 242
  • Evalue 5.00e-61
Regulatory protein TetR {ECO:0000313|EMBL:KEQ52063.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.7
  • Coverage: 196.0
  • Bit_score: 244
  • Evalue 1.10e-61
TetR-family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 62.8
  • Coverage: 196.0
  • Bit_score: 242
  • Evalue 1.60e-61

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Taxonomy

Sphingobium chlorophenolicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 603
ATGACCAAGGCGAAGCCAGCGCCGCGCACCCGCCGCCAACCCACTGAGCAGGGCAGCAACCGTCGCGCACAAATTCTTGAAATCGCAGCCCATCTCTTCGCAGCCAAAGGCTATGCCGGAACTTCGATGCGAGATATCGGCGAGGAAGCGGGGGTGCTGGGCGGCTCGCTTTATCACCATGTCAAATCGAAGGATGCCCTCTTTGCCGAGTTGCATAACAACGCGCTCGATCAGGCCGGAGCGCGAATCGAGGAGGCCATCGCCACCATCGATGATCCATGGAAAAAGCTGGAAATCGCCTGTATCACGATGCTGGAAATCCAGCTCGATCCGCAATCGCTGACCACGCCGCTGATGAATGATTTCCGCATGGCGCCCCAACCGCTGCGCCATCTGCTGATCGAGCGGCGCGATGCTTTTGAGACGATCTTTGCCCGGATCATTGCCGGACTGGATCTGCCGCCGCATATCGACCTGTCGATCTACCGCAACACGCTGCTCACCATGCTCAACCACACGACCGATTGGTATCGCCCGGGCCGCCTGAGCCCCGCCGACATCGGGCGCCAGGTAGCCGCGATCATGCGCGCGGGGCAAGCCTGA
PROTEIN sequence
Length: 201
MTKAKPAPRTRRQPTEQGSNRRAQILEIAAHLFAAKGYAGTSMRDIGEEAGVLGGSLYHHVKSKDALFAELHNNALDQAGARIEEAIATIDDPWKKLEIACITMLEIQLDPQSLTTPLMNDFRMAPQPLRHLLIERRDAFETIFARIIAGLDLPPHIDLSIYRNTLLTMLNHTTDWYRPGRLSPADIGRQVAAIMRAGQA*