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scnpilot_p_inoc_scaffold_28_curated_26

Organism: scnpilot_dereplicated_Paludibacter_1

near complete RP 51 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(27983..28297)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L21 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3Y5_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 85.6
  • Coverage: 104.0
  • Bit_score: 183
  • Evalue 1.40e-43
LSU ribosomal protein l21p; K02888 large subunit ribosomal protein L21 similarity KEGG
DB: KEGG
  • Identity: 85.6
  • Coverage: 104.0
  • Bit_score: 183
  • Evalue 4.60e-44
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.6
  • Coverage: 104.0
  • Bit_score: 183
  • Evalue 2.00e-43

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Taxonomy

Paludibacter propionicigenes → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 315
ATGTACGCAATTGTAGAAATTTTGGGTCAGCAGTTCAAGGCGGAAGCCGGAAAACGACTGTATGTACACCGTATGGAAGAGGCTGCACAAGGCTCGGAAGTAGCATTTGACAAGGTATTGCTCGTAGATAACAATGGGGCCATCACAGTAGGCGCGCCGGTTGTTGAAGGAGCTAAAGTAGTATGTGAAGTATTGTCGCACGTACGTGGCGAGAAAGTAATCGTTTTCCACAAAAAACGTCGTAAAGGGTACCGCAAACGCAATGGTCACCGTCAGAACTTCACCGAATTGAAGATTAAAGAAATTGTAGCGTAA
PROTEIN sequence
Length: 105
MYAIVEILGQQFKAEAGKRLYVHRMEEAAQGSEVAFDKVLLVDNNGAITVGAPVVEGAKVVCEVLSHVRGEKVIVFHKKRRKGYRKRNGHRQNFTELKIKEIVA*