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scnpilot_p_inoc_scaffold_309_curated_42

Organism: scnpilot_dereplicated_Paludibacter_1

near complete RP 51 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 66538..67104

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHU9_FLUTR similarity UNIREF
DB: UNIREF100
  • Identity: 40.7
  • Coverage: 189.0
  • Bit_score: 153
  • Evalue 2.90e-34
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 40.7
  • Coverage: 189.0
  • Bit_score: 153
  • Evalue 9.10e-35
Tax=RBG_13_Caldithrix_44_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 44.3
  • Coverage: 194.0
  • Bit_score: 158
  • Evalue 9.70e-36

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Taxonomy

RBG_13_Caldithrix_44_9_curated → Caldithrix → Bacteria

Sequences

DNA sequence
Length: 567
ATGCTGAGCACTAGTAACCAGCAAAACCAATTATCGGATGAGGAACTCATGGGTCTGCTTGCCTCTGGCGAGCAGACAGCTTTTGATGAATTGTATCGTCGTTACGCTTCCAATATAGTGAACTTTTTCTACAGGATGTTGAACTACGACCGTCAGCGAGCTGAAGATTTATTACACGATTTATTTCTAAAACTGATCGAACATCCTGAATGCTTCGATTGTAACCGGCGTTTTTCCACCTGGTTGTACACGCTTGCCGGTAATATGGTTAAAAATGAATACCGTAGTCGACGTGTACGCTCGGTAAACGTAACGCTCGACGAAGGTGCAGAGCTGTCGATACAAGATAATAACGATCGGGAGTTGTTTTACTCTCAGTTACAAAAAGAGGTGGCAAATCTGGAACCTCAATCGCAGTTGCTTTTCAACTTGAGATTCTCGGAAGAGTTAAGCGTGAAGCAAATAGCCGAATATATCAACTGTGCCGAAGGAACGGTAAAATCGCGCTTGTTTACGTTAACCCGAAAGCTTGCCCGGAAATTAATATTCTATAAACCCGAGTTGTAG
PROTEIN sequence
Length: 189
MLSTSNQQNQLSDEELMGLLASGEQTAFDELYRRYASNIVNFFYRMLNYDRQRAEDLLHDLFLKLIEHPECFDCNRRFSTWLYTLAGNMVKNEYRSRRVRSVNVTLDEGAELSIQDNNDRELFYSQLQKEVANLEPQSQLLFNLRFSEELSVKQIAEYINCAEGTVKSRLFTLTRKLARKLIFYKPEL*