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scnpilot_p_inoc_scaffold_85_curated_25

Organism: scnpilot_dereplicated_Paludibacter_1

near complete RP 51 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 38657..40690

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1F0_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 64.9
  • Coverage: 592.0
  • Bit_score: 725
  • Evalue 3.90e-206
transcription termination factor rho; K03628 transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 64.9
  • Coverage: 592.0
  • Bit_score: 725
  • Evalue 1.20e-206
Tax=CG_Paludi_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 61.2
  • Coverage: 683.0
  • Bit_score: 767
  • Evalue 2.10e-218

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Taxonomy

CG_Paludi_01 → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2034
ATGAGTAATTACAACCTTACACAGCTCGAGTCGAAAGACATGACTGAGCTACGCCAGATTGCCCAGGAACTGGAATTAAAAGTTCCCAATTCAATTTCGCAACAACAACTTGTATATGAGATCCTTGATCGGCAAGCAATCGTCAATGCGCAGGCAAAGGCGGTGAAAGACCAAAACAAACCCGCTAAAGGGCGCCATGTACGCGGACCGGTGAAAAAGGGCTCCGATCAAAAATCCGCTCCTGCAGCCGACTCTAAAAATCAGCAACGGAAACCTGAAAAGCAACGTACCGAAGCCACTCCAAAAGACAGCCAGCAACCAAAGGAAGCAGCGGTTAAGCAGAAGGCAGTGGTAACGGAGAAACAAGAATCGAAGCAAGCCGAAGCGGCAACTCCCGATGCGACAGTACAAAAAACACCGGCCAAACGAGGCCGGAAGCCGAAAGCCGAAAAAACAGCGCCTGCCGAAAATCAATCTGAAAAGGAAAAGGCTGCAAAAATGGCCGAACCGGCTACCGCAAAACCAGCCGACGTAAAACCGACGGACGAATCGCCTGCACAAGCCCCTCGCCGCGATCCGAATCAACCCCGGATGCGTGTAATTAAAAAAGTTCAACCGGCCGAGGCTGCACCGGCCGCAGAAGAAGTAAAAAACATCCTCCCCGAATTGGAAGCCGGCGATCCTTCCGACAACGAAATGCCCGAATTCCCATTAAGCACTGCCGACGATGCCGGCCTGCCCGTTACGAACGAGCAGGAGCCTGAAACTCCCGACGAAACCGCCGAACCGGCGGCAACGATTCAGCAGCCATCGCAACACGGGCATCAGCAACAACAGCAGAAGCAGCAACAGCAAAACAACAACCGTCCGAAATTCGTAGCGCAACGTACCGAACGCCAATACGATTTCGATGGTATTCTGGAAGCAACCGGAACGCTCGATATGGTGGCCGATGGTTATGGCTTCCTCCGTTCCTCCGATTACAACTATTTAAGCTCTCCCGACGATATTTACGTATCGCAATCACAAATCAAACTGTTCGGGCTTCGTCCCGGCGATACGGTTACGGGAGCTATCCGGCCTCCCAAAGAAGGAGAAAAATATTTTCCGCTCATCCGTGTGAGCAAAATCAATGGCCGCAGTCCCGAATATGTGCGCGACCGGGTTCCCTTCGAACACCTCACTCCACTCTTTCCCGATCAGAAATTTACACTCTGCACCGGTAAAAACGATCCGCTTTCGGTTCGTATGGTCGACTTGTTTTCGCCTATCGGGAAAGGCCAGCGTGGTTTGATCGTGGCACAGCCTAAAACAGGTAAAACGGTATTGCTGAAGGAAATTGCCAATGCCATTGCGGTCAATCATCCCGAAGTGTATATGATCGTATTGCTTATCGACGAACGCCCCGAGGAAGTTACCGATATGGCGCGCAGTGTGAAGGCTGAAGTAGTGGCTTCCACCTTCGACGAACCGGCCGAACGCCACGTACGTGTAGCAGCCATGGTTCACGAAAAGGCAAAACGATTGGTGGAATGTGGTCACGACGTGGTGATTCTGCTCGATTCCATTACCCGTTTGGCTCGCGCTTATAATACGGCGATGCCTGCTTCGGGTAAAATCTTGTCGGGTGGGGTAGATGCCAACGCGCTTCACAAACCCAAACGCTTTTTCGGAGCTGCCCGTAATATCGAAAACGGAGGTAGCCTGACGATTATTGCCACAGCACTTACCGAAACCGGCTCGAAAATGGACGATGTGATTTTTGAAGAATTCAAAGGTACGGGAAATATGGAATTGCAATTAGATCGTCGTTTGGCAAACAAAAGAGTATTTCCTGCTGTTGATATTATGGCCTCGAGTACTCGTCGCGACGATTTGCTGCTCGACAACGATACGCTGAACCGTATGTGGATACTGCGCAAGTATCTTGCGGACATGAACGCAGTGGAAGCGATGGAATTCATGAAAGACCGTATGGAACGTACGGTGAATAACGAAGAATTCCTGTTGTCGATGATGAGCGAACGTAAATAA
PROTEIN sequence
Length: 678
MSNYNLTQLESKDMTELRQIAQELELKVPNSISQQQLVYEILDRQAIVNAQAKAVKDQNKPAKGRHVRGPVKKGSDQKSAPAADSKNQQRKPEKQRTEATPKDSQQPKEAAVKQKAVVTEKQESKQAEAATPDATVQKTPAKRGRKPKAEKTAPAENQSEKEKAAKMAEPATAKPADVKPTDESPAQAPRRDPNQPRMRVIKKVQPAEAAPAAEEVKNILPELEAGDPSDNEMPEFPLSTADDAGLPVTNEQEPETPDETAEPAATIQQPSQHGHQQQQQKQQQQNNNRPKFVAQRTERQYDFDGILEATGTLDMVADGYGFLRSSDYNYLSSPDDIYVSQSQIKLFGLRPGDTVTGAIRPPKEGEKYFPLIRVSKINGRSPEYVRDRVPFEHLTPLFPDQKFTLCTGKNDPLSVRMVDLFSPIGKGQRGLIVAQPKTGKTVLLKEIANAIAVNHPEVYMIVLLIDERPEEVTDMARSVKAEVVASTFDEPAERHVRVAAMVHEKAKRLVECGHDVVILLDSITRLARAYNTAMPASGKILSGGVDANALHKPKRFFGAARNIENGGSLTIIATALTETGSKMDDVIFEEFKGTGNMELQLDRRLANKRVFPAVDIMASSTRRDDLLLDNDTLNRMWILRKYLADMNAVEAMEFMKDRMERTVNNEEFLLSMMSERK*