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SCNpilot_cont_1000_bf_scaffold_902_curated_10

Organism: scnpilot_dereplicated_Pandoraea_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(9309..10298)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Pseudomonas fluorescens RepID=UPI000319BB09 similarity UNIREF
DB: UNIREF100
  • Identity: 53.7
  • Coverage: 307.0
  • Bit_score: 314
  • Evalue 1.00e-82
ABC transporter permease {ECO:0000313|EMBL:ERH51961.1}; TaxID=1390371 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens EGD-AQ6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.5
  • Coverage: 312.0
  • Bit_score: 314
  • Evalue 1.80e-82
putative ABC transporter membrane protein; K01998 branched-chain amino acid transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 305.0
  • Bit_score: 311
  • Evalue 3.50e-82

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 990
ATGAGCCGGATCATGAATTTCGCGTCGCCCGTGCTGTTTCCTCTCGCGTTCGCGATTGTCTTGCCGTTCGTCGTGTCGTCTCCGACGCTGGCGGGTTCCGTGCTGGTGTATGCGGTGGCGGCGATGGCCTGCAACCTGCTTCTCGGCTACGGCGGACTGTTGTCCTTTTGTCAGGGCACATTCTTCGGCTTGGGCGGATATCTGTTTGGACTCGCGCTGCTGCGGGGGCATTGTGGGGTTCTCACCGCGCTCGTCGTCGCAATCGTGGGGTGCGGCCTTATCGCCGGACTAATTGGCGCTGTAGCCATCCGGCGCAAAGGGCTGTATTTCGTGATGCTGACGCTGGCTTTCGCACAGCTTTTCTATTTCATCGCGTATTCGCTGCCCGCGTTGACCGGCGGCGACAACGGGATGGAGGGTCTGCCTCGATTGCCAACGTTGCTGCCGTTCCTGAAAGGCCTGCCAGTGGCCGACAGCGTCGCGCTTTACATTCTGATCGCGATCGCATTCATCGCGGCGTATGGCCTGCTGCTTCGCGTGATCGGCTCGCCGTTCGGTTCCGTCCTGATCGCGATTCGCGAGAATGAACATCGCGTCGGGCCGCTTGGCTATAACGTTCGGCACTACAAGACGCTCGCATTTGTTCTGTCAGGTGCCCTGACGGGGCTCGCCGGCGCCATCGATGGCCTATTGCTCGGCATGGTGCCGCTCTCAAATATCGACATCGGCACGAGTCAGAACATTCTGATCGCTGCCATTCTCGGCGGAGCGGGCTCGCTGAGCGGCTCGGTGTTCGGCGCAGCCGCGCTCGTGATAGCGAGTGACTTTCTTTCGGACCTCTGGCCGCGGTGGCAGATGGTGCTCGGCGTACTTCTGGTCTTACTCGTCATTTTCGCGCCGGATGGCTTGTCGGGGCTCTGGCGGCGCCTTGTTTCGCGCGTGCGGCGCCAAACTTATGATCGAAAGGACAAGCAATGGACTACATTCTAG
PROTEIN sequence
Length: 330
MSRIMNFASPVLFPLAFAIVLPFVVSSPTLAGSVLVYAVAAMACNLLLGYGGLLSFCQGTFFGLGGYLFGLALLRGHCGVLTALVVAIVGCGLIAGLIGAVAIRRKGLYFVMLTLAFAQLFYFIAYSLPALTGGDNGMEGLPRLPTLLPFLKGLPVADSVALYILIAIAFIAAYGLLLRVIGSPFGSVLIAIRENEHRVGPLGYNVRHYKTLAFVLSGALTGLAGAIDGLLLGMVPLSNIDIGTSQNILIAAILGGAGSLSGSVFGAAALVIASDFLSDLWPRWQMVLGVLLVLLVIFAPDGLSGLWRRLVSRVRRQTYDRKDKQWTTF*