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scnpilot_p_inoc_scaffold_344_curated_54

Organism: scnpilot_dereplicated_Planctomycetales_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 3
Location: 60223..60642

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.5
  • Coverage: 138.0
  • Bit_score: 176
  • Evalue 3.30e-41
Ribonuclease VapC n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DC64_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 64.5
  • Coverage: 138.0
  • Bit_score: 176
  • Evalue 2.40e-41
nucleic acid-binding protein, contains PIN domain similarity KEGG
DB: KEGG
  • Identity: 64.5
  • Coverage: 138.0
  • Bit_score: 176
  • Evalue 7.40e-42

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 420
TTGAATAAGATCCTGCTCGACACCGACATCTATTCCGAAGTCCTCAAGGGCGTGGATGCAAACGTCGCGAGCCGGGCGAGATCCTATCGACGGGCTCAAGGCGTACTGACCATCTCGGTCGTGACCGTCATGGAGATCGTCCGCGGCTTCCAGCGCAAGCGGAGCACCCGCAGGCTCCAGGACTTCCTCGCGATCATCGCCCGCGAGGAAGTCCTCGACTTCGACCTGGCCGCCGCGGAGTTGGCCGGCCGGATCGCCGGAGACCTGGAGCGGCTCGGCCGGCCGATCGGCGTCGCCGATCCCATGATCGCGGCCATCGCGATCACGCGCGGGATGGCGCTCGCCACGGGCAACACGGCGCATTTCGAGCGCGTCCAACGGCTCGGCCACCCGCTGGCCCTGGTCGACTGGAGGTCCTAG
PROTEIN sequence
Length: 140
LNKILLDTDIYSEVLKGVDANVASRARSYRRAQGVLTISVVTVMEIVRGFQRKRSTRRLQDFLAIIAREEVLDFDLAAAELAGRIAGDLERLGRPIGVADPMIAAIAITRGMALATGNTAHFERVQRLGHPLALVDWRS*