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SCNpilot_cont_300_bf_scaffold_33_curated_135

Organism: scnpilot_dereplicated_Rhizobiales_3

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 12 / 38
Location: comp(139738..139989)

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DNA-binding domain protein n=2 Tax=Rhodopseudomonas palustris RepID=E6VK33_RHOPX similarity UNIREF
DB: UNIREF100
  • Identity: 86.9
  • Coverage: 84.0
  • Bit_score: 149
  • Evalue 1.90e-33
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 86.9
  • Coverage: 84.0
  • Bit_score: 149
  • Evalue 5.80e-34
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:ADU43295.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.9
  • Coverage: 84.0
  • Bit_score: 149
  • Evalue 2.60e-33

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 252
ATGGGTTTCGACTATATTTTTTTGAGAAGGGACTATCCCGTGAGCATGGGAACCGTGAAGTGGTTTAACGCAACCAAAGGTTATGGCTTCATCCAGCCCGACGACGGTGGCAACGACGTGTTCGTGCACATCAGCGCCGTCGAGCGTGCCGGACTTGGAACGCTGCGTGAAGGCCAGAAGATCAGCTACGAAATCGTTGCCGATCGCCGCTCGGGTAAGTCGTCGGCGGATAACCTCCGCGCCGCTGGCTGA
PROTEIN sequence
Length: 84
MGFDYIFLRRDYPVSMGTVKWFNATKGYGFIQPDDGGNDVFVHISAVERAGLGTLREGQKISYEIVADRRSGKSSADNLRAAG*