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SCNpilot_cont_300_bf_scaffold_28_curated_58

Organism: scnpilot_dereplicated_Rhizobiales_3

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 12 / 38
Location: 60878..61492

Top 3 Functional Annotations

Value Algorithm Source
PcaR/PcaU/PobR family beta-ketoadipate pathway transcriptional regulator n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P4U3_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 78.9
  • Coverage: 204.0
  • Bit_score: 325
  • Evalue 4.60e-86
PcaR/PcaU/PobR family beta-ketoadipate pathway transcriptional regulator {ECO:0000313|EMBL:EKS36516.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.9
  • Coverage: 204.0
  • Bit_score: 325
  • Evalue 6.50e-86
IclR family transcriptional regulator; K02624 IclR family transcriptional regulator, pca regulon regulatory protein similarity KEGG
DB: KEGG
  • Identity: 72.1
  • Coverage: 204.0
  • Bit_score: 295
  • Evalue 1.20e-77

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 615
ATGACGCTACAAAAATCAGGTTTCGTCGTCGGTGACGAAAGGCTCTTTTCTCTTACCCCACGCATTCTCACTTTAGCGGCTGCCTACCTCAGTTCCAATCAAATCAGCACAATCATGCAGCCGCTGATGGACGACGTTTCCGCCCAGGCCAAGGAAGTTTGTTCGCTCGCTGTCCTTGATGGCAGCGAAGTCGTGTTCATCGCTCGAGCAAGCCCGACGCGAGTATTCTCGACAGGCATCGATATCGGCTATCGGCTTCCAGCTTTCTGCACATCGGTCGGTCGCGTATTGCTAGGAAGGCTCTCCAATGACGAGCTTGCAGCGGCCATCGCGGGCATGGACCTGAAAATGCTCACGCCTGAAACCAACACAGACAAGTCATTGGTATTGGCGGCCATCATTACCGATCGTAGCAAGGGCTATTCACTTGTGGATCGCGAGGCGGAGCCAGGGTTCAGATCAATCTCAGTTCCCATCTACCGGCATGATGGCGGCATCGTTGCCGCCGCGAATATCGGCGCCCATGTCGATCGCGTAACCACGGGAGAAATGATCGATCGATTCCTGCCGCTCCTCAAGGAGATGTCCGCAGCAGCGCGGCCTTTGCTGGTTTAG
PROTEIN sequence
Length: 205
MTLQKSGFVVGDERLFSLTPRILTLAAAYLSSNQISTIMQPLMDDVSAQAKEVCSLAVLDGSEVVFIARASPTRVFSTGIDIGYRLPAFCTSVGRVLLGRLSNDELAAAIAGMDLKMLTPETNTDKSLVLAAIITDRSKGYSLVDREAEPGFRSISVPIYRHDGGIVAAANIGAHVDRVTTGEMIDRFLPLLKEMSAAARPLLV*