ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2130_curated_22

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(23061..23858)

Top 3 Functional Annotations

Value Algorithm Source
Spermidine/putrescine transport system, permease protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5YE72_PARAH similarity UNIREF
DB: UNIREF100
  • Identity: 71.1
  • Coverage: 263.0
  • Bit_score: 392
  • Evalue 3.10e-106
spermidine/putrescine transport system, permease protein similarity KEGG
DB: KEGG
  • Identity: 71.1
  • Coverage: 263.0
  • Bit_score: 392
  • Evalue 9.60e-107
Spermidine/putrescine transport system, permease protein {ECO:0000313|EMBL:AGT09783.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 263.0
  • Bit_score: 392
  • Evalue 4.30e-106

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Paracoccus aminophilus → Paracoccus → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 798
ATGGAATCGCATGTCACCCACAAGCAGCGCCTCTGGCTTTATATCCTGACGGCCCTGATCCTGCTGTTCCTGGTGGTGCCGACGCTGATCGTCGTGCCGATGTCGTTCAGCTCGGCCAATTCGCTGGCCTTTCCGCCGCCCGGCTGGTCGCTGCGCTGGTATCAGAACTTTTTCGAGCAGGACAAATGGCTGACGGCGGCGCTGGTTTCGCTGCGTACCGCTTTCGGCACGATGATCGTCGCGACCACGGTCGGAACCGCCGCCGCCTACAGCCTGCATGTCGGCAAGTTCGCGCTGCGCGGCACGATCTATGCGACGCTCGCCGCGCCGCTGGCCATTCCCGCCATCCTGCTGGCGATCGGACTGTTCTTCGTCTATGCCTCGGCCGGCCTTCTCAATACAACCGCCGGCCTGATCATCGCCCATACGCTGGTGGCGATCCCCTTCGTGCTGATCACCATGACGGCGGGCTTCAAGTCCTACGACATGAGCCAGGAAATGGTCGCCCGCAGCCTCGGCGCCAACCGGCTGACCGCCTTCCTGACCGTCACCCTGCCGCAGGTGAAGTTCTCGCTGATTTCGGCCGCGCTGCTCGCCTTCATCGTCTCGTTCGACGAGGTGGTCGTCTCGGTCTTCGTTTCCGGCGGGGATGTCTCGACCCTCACCAAGGTGATGTTCCAGACGCTGCGCGACGACATCGATCCAACCATTGCGGCGGTCTCGACCCTGATGCTGGTCATCGCCACCGTGCCGCCGCTCGTCCTGCAGCTCGCGGCCAATCGCAAGCGGGAGTCCTGA
PROTEIN sequence
Length: 266
MESHVTHKQRLWLYILTALILLFLVVPTLIVVPMSFSSANSLAFPPPGWSLRWYQNFFEQDKWLTAALVSLRTAFGTMIVATTVGTAAAYSLHVGKFALRGTIYATLAAPLAIPAILLAIGLFFVYASAGLLNTTAGLIIAHTLVAIPFVLITMTAGFKSYDMSQEMVARSLGANRLTAFLTVTLPQVKFSLISAALLAFIVSFDEVVVSVFVSGGDVSTLTKVMFQTLRDDIDPTIAAVSTLMLVIATVPPLVLQLAANRKRES*