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SCNpilot_expt_1000_bf_scaffold_799_curated_19

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 18662..19501

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Rhizobium giardinii RepID=UPI00037CE7E3 similarity UNIREF
DB: UNIREF100
  • Identity: 77.9
  • Coverage: 281.0
  • Bit_score: 435
  • Evalue 4.30e-119
prow3; glycine betaine/L-proline ABC transporter,permease protein; K02001 glycine betaine/proline transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 77.6
  • Coverage: 281.0
  • Bit_score: 432
  • Evalue 8.80e-119
ABC transporter {ECO:0000313|EMBL:EGP54241.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.9
  • Coverage: 281.0
  • Bit_score: 432
  • Evalue 3.90e-118

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 840
ATGGACATGTCGACGCTTCCGGACACTTTCGACAGCGCCATCGACGACGCGCTGTCCTGGATCAGCGACAATGGCGAGGGCCTGTTCGATTTCATCCGGGCGATCCTCGAAGGCACCTATGACGGCGTTCTCTGGCTGCTGCAGCTTTTGCCGTTCTACGGCATTGCGGCGATCGCCGCCGTCTTCGGATGGCGGCTGGTGGGCCTGCGCTTCGGCATTGCCGCCGGCGTGGCGCTGGTCGTCTGCGCGCTGATGGGCCTGTGGGGCGAAACCATGGGCACGTTGGCGCTGGTGGTCACCGCAACCGTGCTGGCGCTCGCCGCCGGCATTCCGCTCGGCATCGCCGCCGGCTTCCTGACCACGCTCGACCGTATCCTGCAGCCGGTGCTCGACCTCATCCAGACGCTGCCGCCCTATATCTACCTGCTGCCGGCCATCGCGCTGATGGGTTTCGGGCCGGCGACGGCGCTGATCGCCACCGTTATCGTCGCCATGCCGCCGGCCATCCGCCTGACGGCGCTCGGCATGCGCATGACGCCGCGTGAATTCATCGAGCTGGGACAGGCGAGCGGCTTGACCGGCTGGCAGATGTTTTCCAAGATCCGCCTGCCCTTCGCGCTGCCGAGCATCATGGCCGGCATCAACCAGAGCCTGATGATGGCCTTCGGCATGGTGGTCATCGCCGGCATCGTCGGCTCCGGCGGGCTTGGCGAAACCATCTACGGTTCGGTTCGCACGCTCGATATCGCCACCTCGATCAATGCCGCCATCGCCATCGTGATCCTGACCATGGTTCTCGACCGGCTGACGCAGAGCGCCGGTAAGGGAGGGAAAGCATGA
PROTEIN sequence
Length: 280
MDMSTLPDTFDSAIDDALSWISDNGEGLFDFIRAILEGTYDGVLWLLQLLPFYGIAAIAAVFGWRLVGLRFGIAAGVALVVCALMGLWGETMGTLALVVTATVLALAAGIPLGIAAGFLTTLDRILQPVLDLIQTLPPYIYLLPAIALMGFGPATALIATVIVAMPPAIRLTALGMRMTPREFIELGQASGLTGWQMFSKIRLPFALPSIMAGINQSLMMAFGMVVIAGIVGSGGLGETIYGSVRTLDIATSINAAIAIVILTMVLDRLTQSAGKGGKA*