ggKbase home page

SCNpilot_expt_1000_bf_scaffold_799_curated_23

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 21486..22214

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Rhizobium giardinii RepID=UPI00036F8E42 similarity UNIREF
DB: UNIREF100
  • Identity: 65.9
  • Coverage: 223.0
  • Bit_score: 306
  • Evalue 2.00e-80
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 65.9
  • Coverage: 223.0
  • Bit_score: 305
  • Evalue 1.80e-80
Transcriptional regulator GntR family {ECO:0000313|EMBL:ACM39943.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.9
  • Coverage: 223.0
  • Bit_score: 305
  • Evalue 8.20e-80

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Agrobacterium vitis → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 729
ATGAAGGGCGGCAAGTCGGCGCTCCATGAAACGCTGAAACGCCAGATCCTGACGCTCGAGCTGGAGCCGGACGGCGATCTCGACGAGGTGAAGCTCAGCGAGGAATACGGGATTTCGCGCACGCCGGTGCGCGACGTGCTGCGCCAGCTCGCGGTCGACGGCTATGTCGATATCCGCGAGAACCGCGGCGCTCGCGTCGTGCCGATGAATCATTCCACCTTGCGCGATTTCTTCCTCGTCGCGCCGATGATCTACGAGGCGATCGGGCGGCTTGCGGTGCAGAACTGCCGCGCCGGCCAGCTCGACATCCTCAGGGCCTGTCAGGAGCGGTTTCGCGCTGCGGTGATGGCGCGCGACGCGGAAAAGATGGTCATGGAAAACAACCGTTTCCACGAACTGATCGGCGAAATGGCGGGCAGCGCCTTTCTGAAGCCGACACTGAACCGGCTGCTGATCGACCATGCCCGCATCGGCCATACCTTCTTCCGCCCCGCGACTGCGGAGATGGAAGACAACCTCGCCAAATCCTGCCTGCATCACGACCGGATGATCGAGGCGCTGGCGCAGCGCGACGAGACCGCGATGATCAATCTCGTTTTTGAACACTGGGATCTGTCGCGGCAGAACATGGAGCTGTTCATCGCGCCGAAGGCCCTGACCTCGGAAACCAACCGCCGCGTCGCCGCGCGCCGCGACAGCGAAGAAAGCCTGTCCGAGGTTTCATCGTAA
PROTEIN sequence
Length: 243
MKGGKSALHETLKRQILTLELEPDGDLDEVKLSEEYGISRTPVRDVLRQLAVDGYVDIRENRGARVVPMNHSTLRDFFLVAPMIYEAIGRLAVQNCRAGQLDILRACQERFRAAVMARDAEKMVMENNRFHELIGEMAGSAFLKPTLNRLLIDHARIGHTFFRPATAEMEDNLAKSCLHHDRMIEALAQRDETAMINLVFEHWDLSRQNMELFIAPKALTSETNRRVAARRDSEESLSEVSS*