ggKbase home page

SCNpilot_expt_1000_bf_scaffold_6335_curated_2

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 858..1379

Top 3 Functional Annotations

Value Algorithm Source
DinB family protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C9Y3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 78.1
  • Coverage: 169.0
  • Bit_score: 276
  • Evalue 2.10e-71
DinB family protein {ECO:0000313|EMBL:EYR78790.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.1
  • Coverage: 169.0
  • Bit_score: 276
  • Evalue 2.90e-71
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 67.9
  • Coverage: 165.0
  • Bit_score: 240
  • Evalue 5.20e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 522
ATGCTCGATCACTACCGCATGTTCGCCGCCTACAATGCCTGGGCCAATCGCGTGCTCTACGAGGAGGTCGGCAAGCTCGACGATGCCGACTACCGCCGGAACCTCGGCGCCTTCTTCGGCTCGCTGCACGGCACGCTGAACCACCTTTTGTCGGCGGACCGCATCTGGATGCGCCGCTTTACCGGCGAAGGCCAGGCGCCGGCGAGCCTCGACACGATCCTGCACGAGGATTTTGCCGGCCTGCGGGCGGCGCGGCAGGCGGAGGACGCGCGCCTTGCCGCCTATGTCGGTTCGCTGACGGAAGAAAGGATCGCGGCACATTTCACCTACAGCCCGATCACCAGTCCTGCGGTCATCACCCACCCGCTCGGCCCCGCGCTGGCGCACCTCTTCAACCACCAGACCCACCACCGCGGCCAGTGCCATGCCATGCTGACGACGCTCGGCGGCCCGAGTATCACGCTCGACCTCATCTCCTTCGTGCGCACCGAGGGCGCCGGCCTCCTGAAAGCTGCGGGGTGA
PROTEIN sequence
Length: 174
MLDHYRMFAAYNAWANRVLYEEVGKLDDADYRRNLGAFFGSLHGTLNHLLSADRIWMRRFTGEGQAPASLDTILHEDFAGLRAARQAEDARLAAYVGSLTEERIAAHFTYSPITSPAVITHPLGPALAHLFNHQTHHRGQCHAMLTTLGGPSITLDLISFVRTEGAGLLKAAG*