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SCNpilot_expt_1000_bf_scaffold_1340_curated_20

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(15463..16707)

Top 3 Functional Annotations

Value Algorithm Source
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1) similarity KEGG
DB: KEGG
  • Identity: 95.4
  • Coverage: 412.0
  • Bit_score: 778
  • Evalue 1.30e-222
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.2
  • Coverage: 413.0
  • Bit_score: 778
  • Evalue 5.70e-222
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=2 Tax=Rhizobium RepID=U4Q0U5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 95.4
  • Coverage: 412.0
  • Bit_score: 778
  • Evalue 4.00e-222

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Taxonomy

Rhizobium sp. H41 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1245
ATGTCCTCTGATTATGATCCGAAAACGCGCCGCGCCTCTGTCGCCGTCGATGTCGGCGGCGTCATCGTCGGCGGCGGCGCGCCGGTTGTCGTGCAGTCGATGACCAACACCGATACCGCCGATATCGACGCCACCGTCGCCCAGGTGGCCGCCCTGTTCAAGGCCGGCTCCGAGATCGTGCGCATCACCGTCGACCGCGACGAAAGTGCCGCCGCCGTGCCGAAAATCCGCGAGCGGCTGCTGCGGCTAGGGCTGGACGTGCCACTGGTCGGCGATTTTCATTATATCGGCCACAAGCTGCTTGCCGATCACCCGGCCTGCGCCGAGGCGCTGGCGAAGTACCGCATCAATCCCGGCAATGTCGGCTTCAAGGACAAGAAGGACAAGCAGTTTGGCGATATCGTCGAAATGGCGATCCGCCATGACAAACCGGTGCGCATCGGCGTCAACTGGGGCTCGCTCGACCAGGAACTGCTGACCGCGCTGATGGACCGCAACAAGGCGGAGGGCTTCCCGCTCTCGGCCCGGCAGGTGACGCGCGAGGCGATCGTGCAATCGGCGCTGATCTCGGCCAATCTCGCGGAAGAAATCGGCCTGGCGCGCAATCGCATCATCCTCTCGGCCAAGGTCAGCCAGGTGCAGGACCTGATCGCCGTCTATTCGATGCTGGCGGAGCGCTCCGACCACGCCCTGCATCTCGGCCTCACCGAGGCCGGCATGGGTTCCAAGGGCATCGTCGCGTCGTCGGCCGCCATGGGCTACGTGCTGCAGCACGGCATCGGCGATACGATCCGCGTGTCCCTGACGCCGGAGCCGAACGGCGACCGCACCCGTGAGGTGCAGGTGGCGCAGGAACTGCTGCAGGTCATGGGTTTCCGCCAGTTCGTGCCGGTCGTCGCCGCCTGTCCGGGCTGCGGGCGCACCACGTCCACTGTCTTCCAGGAACTTGCTCAGAACATCCAGAACGACCTGCGCAAGAACATGCCGGTCTGGCGCGAGAAATATCCGGGCGTCGAGGCGCTGAACGTCGCGGTCATGGGCTGCATCGTCAACGGTCCCGGCGAAAGCAAGCATGCCGATATCGGCATCTCGCTGCCCGGTACCGGCGAATCGCCCGCCGCCCCCGTCTTCATCGACGGCCAGAAGGCGATGACGCTGCGCGGCCCCAACATCGCCGCCGATTTCGAGGCGCTGGTGATCGATTACATCGAGAAGCGTTTCGGGCAGAAGACGGCGGCCGAATAG
PROTEIN sequence
Length: 415
MSSDYDPKTRRASVAVDVGGVIVGGGAPVVVQSMTNTDTADIDATVAQVAALFKAGSEIVRITVDRDESAAAVPKIRERLLRLGLDVPLVGDFHYIGHKLLADHPACAEALAKYRINPGNVGFKDKKDKQFGDIVEMAIRHDKPVRIGVNWGSLDQELLTALMDRNKAEGFPLSARQVTREAIVQSALISANLAEEIGLARNRIILSAKVSQVQDLIAVYSMLAERSDHALHLGLTEAGMGSKGIVASSAAMGYVLQHGIGDTIRVSLTPEPNGDRTREVQVAQELLQVMGFRQFVPVVAACPGCGRTTSTVFQELAQNIQNDLRKNMPVWREKYPGVEALNVAVMGCIVNGPGESKHADIGISLPGTGESPAAPVFIDGQKAMTLRGPNIAADFEALVIDYIEKRFGQKTAAE*