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SCNpilot_expt_1000_bf_scaffold_5261_curated_5

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(4879..6009)

Top 3 Functional Annotations

Value Algorithm Source
Multidrug resistance efflux pump n=1 Tax=Nitratireductor indicus C115 RepID=K2NWM1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 98.1
  • Coverage: 364.0
  • Bit_score: 685
  • Evalue 4.20e-194
Multidrug resistance efflux pump {ECO:0000313|EMBL:EKF42209.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.1
  • Coverage: 364.0
  • Bit_score: 685
  • Evalue 5.90e-194
multidrug resistance efflux pump; K03543 multidrug resistance protein A similarity KEGG
DB: KEGG
  • Identity: 53.3
  • Coverage: 349.0
  • Bit_score: 374
  • Evalue 2.90e-101

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Taxonomy

Nitratireductor indicus → Nitratireductor → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1131
ATGATAAGAACCAACATGACCTGCCGACAGGCTCTTCTGAGGACAGGCCCGCCGACCGTGCCCCCGACCAGGACGGGAGTCCGGGTCGGCGTGCTCGTTATCGGGCTCATGGTCGCCTTCGTAGCCTGGTACGCCGTTTCCGACAAGCTCGCCCCCTATACCGACCGCGGCACGGTCAGCGGCTACATTGCCCGACTAGCGCCCCGTGTTTCAGGCCCGGTAATCAGCGTCCACGTTGAGGACAATACGATTGTCCAGGAGGGCGATCTTCTTTACGTGGTCGACCCGCGCCCGTTCGAGATCGCGGTCCAGCAGGCGGAAGTCGAACTCGAACAGGCGACCCAGTCAATCAACGCCTCGTCGGCGGCGCTGATCGCTGCACAGGCCAAGGTGTCGCAGGCCAGGGCCAAATTCGAAAACGCCAAGACCTCGAACGCCAGGACGCAAAGCCTTGTACAGCGTGGTGTTGCCGCGCGGAAGCAGGAGGAAGCATCTCGCGCGGAACTCGAGGTCGCGCAGGCGGAGGTCGATGCGGCGGAGGCTGATCTGTCTAGCGCGGAAGCCGAGTTGGGGGCGGCGGGCGCCAGCAATCCGCGCATCAAGGCCGCTCGACTCAAGCTGGAAAGGGCGCAGCTCGACCTGATCTACACACGGGTCGTGGCACCGACGCTCGGCGTGGTCACGAATCTCGATCTAGCAGTCGGCCAGTACGTGAGCGCGGGTTCGGCCGCTCTCACCTTCATCGACGGAAGGGGAGCCTGGATCACGGCCGATATGCGCGAGAACCAGCTCGCCAATATCGAGCCGGGCAACAAGGTGGGCCTGCTTTTCGATGCCTTGCCGGGGCAGATTTTTACCGGGACCGTACACAGCGTCGGCTGGGGCATCGATACCGGACGGACCGCATCCAGCGGTCTGGTGCAGAACGAGCCGGAAACGCGCTGGTTCGAGCCGGCCCGCCGGTTTCCCGTGCGCATTGAACTCGATCGAGCGCTTTCGGAATGGCCTCGCACCGTCAGGGTGGGCGCGAAGGCCACCGTCGTGGTCTACGCCGCAGGCGAAAGCAATCCGTCAGCGTGGATCGCAATGGCCCTGCACCGCGCCCAGTCGCTTCTGTCCTATCTGTATTGA
PROTEIN sequence
Length: 377
MIRTNMTCRQALLRTGPPTVPPTRTGVRVGVLVIGLMVAFVAWYAVSDKLAPYTDRGTVSGYIARLAPRVSGPVISVHVEDNTIVQEGDLLYVVDPRPFEIAVQQAEVELEQATQSINASSAALIAAQAKVSQARAKFENAKTSNARTQSLVQRGVAARKQEEASRAELEVAQAEVDAAEADLSSAEAELGAAGASNPRIKAARLKLERAQLDLIYTRVVAPTLGVVTNLDLAVGQYVSAGSAALTFIDGRGAWITADMRENQLANIEPGNKVGLLFDALPGQIFTGTVHSVGWGIDTGRTASSGLVQNEPETRWFEPARRFPVRIELDRALSEWPRTVRVGAKATVVVYAAGESNPSAWIAMALHRAQSLLSYLY*