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SCNpilot_expt_1000_bf_scaffold_2037_curated_15

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(16042..16410)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein, putative n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UC98_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 76.5
  • Coverage: 119.0
  • Bit_score: 173
  • Evalue 1.80e-40
DNA-binding protein, putative {ECO:0000313|EMBL:EGP55076.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.5
  • Coverage: 119.0
  • Bit_score: 173
  • Evalue 2.50e-40
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 68.9
  • Coverage: 122.0
  • Bit_score: 165
  • Evalue 1.50e-38

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 369
ATGGCACGGAGCCTGAACGAAATCATTGCCGAGCTGCCGCCGGAGCGCCAGGCCGACATTGAGGCCCGCTATCAGGAGCTCAAGGAGGAAGTCGAAGGCCTTCGGGAGCTGCGCCAGATCGCCGGCAAGGCGCAAGCCGAGATCGCCACCGCGCTCAACATCAAGCAGCCCTCGGTTTCCAAGATCGAGAAGCAAGCCGATATGTATCTCTCGACACTCCGCAGCTATGTGGAGGCTGTCGGCGGCAAGCTGGAACTCATGGTGAAACTGCCGAAACGGCCGGCCATGCGCATTCATCATCTCGGTGACGTCGCACCGGCGGTGCGTACGCCAAAACCAACCCGGGCAGCCAAACAGCGCCATGGATGA
PROTEIN sequence
Length: 123
MARSLNEIIAELPPERQADIEARYQELKEEVEGLRELRQIAGKAQAEIATALNIKQPSVSKIEKQADMYLSTLRSYVEAVGGKLELMVKLPKRPAMRIHHLGDVAPAVRTPKPTRAAKQRHG*