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SCNpilot_expt_1000_bf_scaffold_1583_curated_18

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 14474..14806

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbC n=4 Tax=Alphaproteobacteria RepID=C8WDW1_ZYMMN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 110.0
  • Bit_score: 209
  • Evalue 2.00e-51
conjugal transfer protein Trbc; K03197 type IV secretion system protein VirB2 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 110.0
  • Bit_score: 209
  • Evalue 6.30e-52
Conjugal transfer protein TrbC {ECO:0000313|EMBL:EQB00579.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. HDIP04.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 110.0
  • Bit_score: 209
  • Evalue 2.80e-51

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Taxonomy

Sphingobium sp. HDIP04 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 333
ATGATCCGCACGATTTCACGCGGCTGCCGCATCATGGCAACCGCCGCTGCCACTGTTTCCATCAGTCTGATGCTGGCGCCTGCCGCACACGCCTCCGGCTCCTCCATGCCCTGGGAGGCCCCGCTTCAGTCGATCCTCCAGTCGATAGAAGGTCCTGTCGCCAAGATCATCGCCGTCATCGTCATCATCGCCACCGGCCTGGCGCTGGCCTTTGGCGATACCTCCGGCGGCTTCCGCCGCCTGATCCAGATCGTCTTCGGCCTGTCCATCGCCTTCGCTGCGTCGAGCTTCTTCCTGTCGTTCTTCTCGTTCGGCGGCGGGGCGCTCATCTGA
PROTEIN sequence
Length: 111
MIRTISRGCRIMATAAATVSISLMLAPAAHASGSSMPWEAPLQSILQSIEGPVAKIIAVIVIIATGLALAFGDTSGGFRRLIQIVFGLSIAFAASSFFLSFFSFGGGALI*