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SCNpilot_expt_1000_bf_scaffold_1333_curated_15

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(13474..15123)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002D384B8 similarity UNIREF
DB: UNIREF100
  • Identity: 89.9
  • Coverage: 545.0
  • Bit_score: 1001
  • Evalue 3.90e-289
ABC-type dipeptide transport system periplasmic component {ECO:0000313|EMBL:EYR78614.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.9
  • Coverage: 549.0
  • Bit_score: 999
  • Evalue 1.60e-288
extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 81.0
  • Coverage: 541.0
  • Bit_score: 879
  • Evalue 4.10e-253

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1650
ATGAACAGGGAAAAGACCACGATGCGCATTCGTCCGCTGCTCGTCAGCGCTGCTTTCTCGCTGCTGTCCGTCGCGGCGGGCATCGCCCCGGCCTATGCCGGCACCCCGGCCGATACGCTCGTTCAGGCCTGGGCGATCGACGACACGATCACCCTGGATCCCGCCGAATCCTTCGAACTGAGCCCGGCCGAATTCATCGGCAACGGCTACGACATGCTGGTTCGGCTCGACATCGACGACACGACCAAGGTCAAGGGCGGTGTCGCCGATAGCTGGACCGTATCCGACGATGGCCTGACCTATACGTTCAAGCTGAAGCCGGGCATCAAGTTCGCCTCCGGCAATCCGCTGACCGCCGAGGACGTCGCCTGGTCGTTCGAGCGCGTCGTCAAGCTGGACAAGAGCCCGGCCTTCATTCTCACCCAGTTCGGGCTCACCGGCGACAATGTCACCGAGAAGGCCAAGGCGATGGACGCGGGCACCTTCGTGCTGACCGTCGACAAGGCCTATGCGCCGAGCTTCGTGCTCAACTGCCTCACCGCGACGGTGGGCGCCGTGCTCGACAAGAAGCTGGTGATGGAGCATGCCGAGGCCAAGACGCCGAATGCCGACTACAAATACGATACCGACTTCGGCTATGCGTGGATGAAGACCAATTATGCCGGCTCCGGCCCGTTCAAGATCCGCGACTGGCGCGCCAACGAAATCCTCGCGATGGAGCGCAACGACAATTATTACGGGGAAAAGCCGAAGCTGGCCCGCGTCATCTATCGCCATGTCAAGGAAAGCGCGACCCAGCGGCTGATGCTGGAAGCCGGTGATGTCGACGTCGCCCGCAATCTCGATCCGGGCGATCTCGAAGCGGTGACCAAGAATGCCGATCTCGCCGTCACCAGCGCGCCGAAGGGCACCGTCTATTACATCAGCCTCAACCAGAAGAACGAAAAGCTCGCCAAGCCGGAAGTGCGCGAGGCAATGAAATATCTCGTCGATTACGATGCGATCGGCGCGACGCTGATCAAGGGCATCGGCGAGATCCGCCAGACCTACCAGGCCAAGGGCGTGCTCGGCGCACTCGATGCCAGCCCCTACAAGTTCGACGTCGCCAAGGCCAAGGAACTGCTTGAAAAGGCCGGCCTGAAGGACGGTTTCTCCGTCACCTTCGACGTGCGCAACACCCAGCCGGTAACCGGCATTGCCGAATCCTTCCAGCAGACCGCCGGTCAGGCCGGCGTCAAGGTCGAGATCATTCCCGGTGACGGCAAGCAGACGCTGACCAAGTATCGCGCCCGCAACCACGATATGTATATCGGCCAGTGGGGCATGGATTACTGGGATCCGAACTCGAATGCGGAAGCCTTCACCTCCAACCCGAACAATGCCGACGACGCCGCAGTAAAGACACTCGCCTGGCGCAATGCCTGGGACATTCCGCAACTGACCGAGCAGGTCAAGGCCGCCCTTCTGGAGCGCGACAACGACAAGCGCGCCGACATGTACAAGAAGCTGCAGCAGGAGGCGCTGGATACCAGCCCCTTCGTCATGATCTTCCAGCAGACCGAAGTGGCCGGGATGCGCGGCAGCGTCAAGGGCTACAAGCTGGGGCCGAGCTTCGATTCGAACTTCCTCGCGCCCATTTCCAAGGAATGA
PROTEIN sequence
Length: 550
MNREKTTMRIRPLLVSAAFSLLSVAAGIAPAYAGTPADTLVQAWAIDDTITLDPAESFELSPAEFIGNGYDMLVRLDIDDTTKVKGGVADSWTVSDDGLTYTFKLKPGIKFASGNPLTAEDVAWSFERVVKLDKSPAFILTQFGLTGDNVTEKAKAMDAGTFVLTVDKAYAPSFVLNCLTATVGAVLDKKLVMEHAEAKTPNADYKYDTDFGYAWMKTNYAGSGPFKIRDWRANEILAMERNDNYYGEKPKLARVIYRHVKESATQRLMLEAGDVDVARNLDPGDLEAVTKNADLAVTSAPKGTVYYISLNQKNEKLAKPEVREAMKYLVDYDAIGATLIKGIGEIRQTYQAKGVLGALDASPYKFDVAKAKELLEKAGLKDGFSVTFDVRNTQPVTGIAESFQQTAGQAGVKVEIIPGDGKQTLTKYRARNHDMYIGQWGMDYWDPNSNAEAFTSNPNNADDAAVKTLAWRNAWDIPQLTEQVKAALLERDNDKRADMYKKLQQEALDTSPFVMIFQQTEVAGMRGSVKGYKLGPSFDSNFLAPISKE*