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SCNpilot_expt_1000_bf_scaffold_5104_curated_3

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(1639..2727)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Agrobacterium sp. 224MFTsu3.1 RepID=UPI000379AFD6 similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 364.0
  • Bit_score: 653
  • Evalue 1.00e-184
Peptide ABC transporter transmembrane protein {ECO:0000313|EMBL:EHH04778.1}; TaxID=1082932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens CCNWGS0286.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.5
  • Coverage: 364.0
  • Bit_score: 652
  • Evalue 4.10e-184
peptide ABC transporter permease; K13894 microcin C transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 88.1
  • Coverage: 362.0
  • Bit_score: 650
  • Evalue 2.70e-184

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1089
ATGGGTGCCTATATCCTGCGACGCCTGCTGTTGATGATCCCGACCATCGTCGGCATCATGGCGATCTCCTTCGCGGTCATCCAGTTCGCGCCCGGCGGGCCGGTCGAGCGGGTCATCGCCGATCTCACCGGCCAGGGCGACAGTGCTGCGGACCGTCTTTCGGGGGGCGGCGATCTCGTTGGCCAGCAGGGCGGCGACGCGACAGGCAATTATCGCGGCGCGCAGGGGCTCGATCCCGACCTGATCGCGAAGCTGGAAAAGCAGTTCGGCTTCGACAAGCCGCCGCTCACCCGTTTCGGCGAGATGATGTGGAACTATATTCGCTTCGATTTCGGCGAAAGTTTCTTCCGCAACACGCCGGTCATCGACCTGATTGCCGAGAAGCTGCCGGTGTCGATTTCGCTCGGCGTCTGGATCCTCTTGTTTTCCTACATCATTTCTATTCCGCTCGGCATCAAGAAGGCGGTGGAGGACGGCTCGCCCTTCGACGTCTGGACCTCCGGCGTCATCATCATCGGTTATGCCGTGCCGAGCTTCCTGTTCGGCATCCTGCTGATCGTCGTGTTCGCCGGCGGCTCGTTCTTCGACTGGTTCCCGTTGCGCGGCTTGGTCTCGGACAATTTCGCCGATCTCAACTGGTGGCAGAAGATCCTCGATTATTTCTGGCACCTGACCCTTCCGCTGATCTCGCTGTCGCTGGCGGCCTTCGCCACCACGACGCTGTTGACGAAAAATTCCTTCATCGACGAGATCAAGAAGCAATATGTGACGACCGCGCGCGCCAAGGGCCTGACCGAACGCGAGGTGCTTTACGGCCATGTGTTCCGCAACGCCATGCTGATCGTCATCGCCGGCTTTCCCGGCGCCTTCATCTCGGCCTTCTTCACCGGCTCTCTGCTGATCGAAAACATCTTCTCGCTCGATGGTCTCGGACGCCTCGGCTATCTCTCGGTGGTCAACCGCGATTATCCGATCGTGTTTGCGACGCTCTATATCTTCTCGCTGCTCGGCCTTGTCGTCGGGCTTGTCTCCGACCTGATCTATACATGGATCGACCCACGCATCGATTTCGACCGGAGGGACGTCTGA
PROTEIN sequence
Length: 363
MGAYILRRLLLMIPTIVGIMAISFAVIQFAPGGPVERVIADLTGQGDSAADRLSGGGDLVGQQGGDATGNYRGAQGLDPDLIAKLEKQFGFDKPPLTRFGEMMWNYIRFDFGESFFRNTPVIDLIAEKLPVSISLGVWILLFSYIISIPLGIKKAVEDGSPFDVWTSGVIIIGYAVPSFLFGILLIVVFAGGSFFDWFPLRGLVSDNFADLNWWQKILDYFWHLTLPLISLSLAAFATTTLLTKNSFIDEIKKQYVTTARAKGLTEREVLYGHVFRNAMLIVIAGFPGAFISAFFTGSLLIENIFSLDGLGRLGYLSVVNRDYPIVFATLYIFSLLGLVVGLVSDLIYTWIDPRIDFDRRDV*